Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq98 587 1e-162 seq28 446 2e-120 >seq98 Length=41871 Score = 587 bits (650), Expect = 1e-162 Identities = 706/957 (74%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548 ||| | || ||||||||| | || ||||| |||||| | ||||| ||||| || || || Sbjct 41545 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 41486 Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607 |||||| | ||| || |||||||||||| | | ||| || ||||| || || || || || Sbjct 41485 GCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTAT 41427 Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667 |||||||| || |||| || | | || |||||||| || || |||||||| || | Sbjct 41426 TCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTAT 41367 Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727 ||||| ||| ||| || ||| | ||||| |||||||| |||||||| || | | || Sbjct 41366 TCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGA 41307 Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787 |||||| | |||||||| ||||||| ||||| |||| | |||||| | ||||| | Sbjct 41306 TGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 41247 Query 174788 CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGAT 174847 || ||||| |||||||||||||| || ||||| |||||| | |||||||| Sbjct 41246 AGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 41187 Query 174848 CTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTT 174907 ||| ||||| || || || |||||||||||| | || || ||| | | || || | Sbjct 41186 TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAAT 41127 Query 174908 CGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACAT 174967 |||||||| || || |||| ||||| || || |||||||| || ||||||| || Sbjct 41126 TGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTAT 41067 Query 174968 GTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGC 175027 | | || ||||| || || || |||||| | |||||||| || || ||||| || || || Sbjct 41066 GATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGC 41007 Query 175028 AGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACT 175087 ||||| ||||| || || | ||| || ||||||||||| | || ||||| | Sbjct 41006 GGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCAAGTTT 40947 Query 175088 TGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGA 175147 || | || || || |||| ||| || || | |||||||| || || ||||||| Sbjct 40946 GATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGG 40887 Query 175148 AGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 175207 || || ||||| ||||| || || ||||| || || || || |||||||||||||| || Sbjct 40886 GGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 40827 Query 175208 TTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTAT 175267 | ||||||||||| || ||| | ||||||||| |||| || ||||| || | ||||| Sbjct 40826 TAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTAT 40767 Query 175268 CTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAA 175327 |||||||||||| | ||| || ||| ||||| |||||| | ||||||||||| ||||| Sbjct 40766 CTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 40707 Query 175328 CCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAG 175387 ||| || || | || | |||||| | ||| | || || ||||| ||| || | ||| | Sbjct 40706 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 40647 Query 175388 AGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444 ||| ||||| |||||||| |||||||| | ||||| ||||||||||| ||||| Sbjct 40646 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGA 40590 >seq28 Length=37419 Score = 446 bits (494), Expect = 2e-120 Identities = 708/1010 (70%), Gaps = 4/1010 (0%) Strand=Plus/Minus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | ||| | || | || ||||| || | Sbjct 31327 TGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCT 31268 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| || |||| | || || ||| | || || ||||||||||| Sbjct 31267 ATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGT 31208 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGG-TGCTAACTTTCTCA 176031 || ||||| |||||||| | || |||||| | || || ||| ||||| | | Sbjct 31207 AACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAA 31149 Query 176032 CAGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTC 176091 | || || || || || |||||| || | | | |||||| | | |||| ||||||| Sbjct 31148 CCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTC 31089 Query 176092 CTGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTG 176151 ||||| | || || || || || ||| ||| | || || || ||| | ||||||| Sbjct 31088 CTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTG 31029 Query 176152 CTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGAC 176211 |||||||||| || |||| || || || || ||| | ||||| |||||| | || || Sbjct 31028 CTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGA- 30970 Query 176212 TCATTGGTATC-CGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTC 176270 || || || || || || || || || ||||| |||||| || ||||| ||||| Sbjct 30969 TCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTT 30910 Query 176271 AGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGT 176330 ||| || || | || || ||||||||||| ||||||||||| || |||||| Sbjct 30909 TCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGT 30850 Query 176331 GTGGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAAC 176390 || ||||| || ||| ||||| | ||||| | || || || || || |||||||||||| Sbjct 30849 GTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAAC 30790 Query 176391 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCAT 176450 || || ||||||||||||||||||||| || | || | || || || | || || ||| Sbjct 30789 CCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCAT 30730 Query 176451 GGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCG 176510 || | |||||| |||||||| ||| |||||| || || || || ||| || Sbjct 30729 GGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCT 30670 Query 176511 TTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCG 176570 || | | || || | ||||| || ||||| ||||| || || |||||||| ||||| Sbjct 30669 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCC 30610 Query 176571 CAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTC 176630 |||||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| Sbjct 30609 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 30550 Query 176631 CCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGT 176690 || || | ||| | ||| | | |||| | | || || ||||| || || ||| Sbjct 30549 CCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGT 30490 Query 176691 GCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTC 176750 || ||||| || || || || || | ||||| ||||||||||| ||||| |||||| Sbjct 30489 GCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 30430 Query 176751 TACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAA 176810 || || || || || ||| | || ||||| | | || |||||||| || ||||| Sbjct 30429 TATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAG 30370 Query 176811 CCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 || ||||| || ||||||| || || |||||||| | || ||||| Sbjct 30369 CCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGC 30320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 727794446430560