Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq98 589 3e-163 seq28 500 1e-136 >seq98 Length=41871 Score = 589 bits (652), Expect = 3e-163 Identities = 728/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || ||| | ||| | |||||| ||||| || || |||| ||| | ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 || || || || || || || ||||||||||| |||| || | | || || ||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || || |||||||| || |||| |||| ||| || ||| | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207 | |||||| | ||||| | | |||||||| ||||||||||||||| | ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267 ||| ||||||||||| ||||| ||| ||||| || ||||| || |||||||| | || Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327 || ||| || | || || | |||||||| ||||| |||| ||||| | || || Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387 ||||||||| ||||||| ||| |||| ||||| || || |||||||| || |||||||| Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447 || || ||||| || || || ||||||||||| || || || |||||||| ||||| || Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507 ||| ||||| || || | | | ||||| || |||| ||||| || | || Sbjct 40967 TTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 40908 Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567 ||| || || || ||||||| || || || || ||||| || || ||||| || || || Sbjct 40907 TTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 40848 Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627 || |||||||||||||||||| ||||||||||| |||||| | ||||||||||| || Sbjct 40847 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGC 40788 Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687 || ||||||||| | || |||||||||||||| | || | ||||| ||||| || || Sbjct 40787 TGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAA 40728 Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747 | | ||||| ||||| |||||||| ||| | | || | ||||| ||||| | || || Sbjct 40727 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 40668 Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807 ||||| || | |||||||||| || || |||||||| ||||| || || || || Sbjct 40667 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 40608 Query 178808 GCACAACTTCCCGCTTGATCTTGCAGCAGCTGA 178840 ||||||||||| || || || || || | ||| Sbjct 40607 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 500 bits (554), Expect = 1e-136 Identities = 710/994 (71%), Gaps = 12/994 (1%) Strand=Plus/Minus Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292 |||| |||||| | |||| || ||||| || || |||||||| || || | || Sbjct 31319 TGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCT 31260 Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352 |||| ||| || |||| | || |||||| | || || ||| ||||||| || | Sbjct 31259 TTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCT 31200 Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGG-TGCTAACTTTCTTACGGCAGCT 179411 |||| ||||| || | || || |||||| | || || ||| ||||| | || || || Sbjct 31199 GGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCA 31141 Query 179412 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179471 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 31140 GTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCG 31081 Query 179472 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 179531 || ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||| Sbjct 31080 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAC 31021 Query 179532 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG---CCTG--A 179586 || || |||| || || ||||| ||| | | ||||||||| ||||||| | || | Sbjct 31020 GGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGATCCGTGCAA 30961 Query 179587 TTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTG 179646 ||| ||||||| ||||| || || ||||||||||| |||||||| || || || Sbjct 30960 TTGC-----GACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTG 30906 Query 179647 TTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCG 179706 | ||||| || ||||| | || || ||| |||||| || || || |||||||| | Sbjct 30905 TATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAG 30846 Query 179707 CGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCT 179766 | || || || | ||| | ||||| | || || || || || ||||| || ||||| | Sbjct 30845 CAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGT 30786 Query 179767 TCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAG 179826 | ||||||||||||||||||||| || | || | || ||||| | ||||| ||||| | Sbjct 30785 TTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTG 30726 Query 179827 TTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTG 179886 |||||| || ||||| || | |||||| || || |||||||| || || ||| Sbjct 30725 CTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTA 30666 Query 179887 ATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 179946 | | || || | ||||| |||||||| |||||||| || |||||||| ||||| || | Sbjct 30665 ACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAA 30606 Query 179947 TCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTG 180006 |||| || |||| ||||| || || || ||| | ||||| || ||||| ||||| || | Sbjct 30605 TCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAG 30546 Query 180007 TTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTT 180066 | | ||| |||||| | || |||| | | ||||| ||||| ||||| ||||| | Sbjct 30545 TAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCT 30486 Query 180067 ACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACA 180126 | || ||||| |||||| ||| | ||||| |||||||| || |||||||| ||||| | Sbjct 30485 ATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATA 30426 Query 180127 CCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCAC 180186 |||| || |||||| | |||||||| | ||||| ||| |||| | ||||| || | Sbjct 30425 CCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTC 30366 Query 180187 ATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCC 180220 |||| | ||||||| || || ||||| || Sbjct 30365 ATGAAAACCTTATATTCCCCGAGGAGGTTCTACC 30332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604236931018560