Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq98 592 2e-164 seq28 506 2e-138 >seq98 Length=41871 Score = 592 bits (656), Expect = 2e-164 Identities = 733/997 (74%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 158378 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 158437 |||||| | ||| |||| ||| | ||||| || || | || ||||| || || | Sbjct 41567 TTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 41508 Query 158438 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 158496 |||||| || ||| | ||| | ||||| ||||| || || |||| ||| | ||||| | Sbjct 41507 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 158497 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 158556 | || || || || || || || ||||||||||| |||| || | | || || |||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 158557 ACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 158616 | || || |||||||| || | || |||| ||| || ||| | ||||| || || | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 158617 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 158676 | |||||||| ||||| ||||||| ||| | || ||||| ||||||| |||| | | Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 158677 TCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACC 158736 | | |||||| | | || | | || ||||| ||||| ||||||||| | || Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 158737 GCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTG 158796 | || ||||||||||| ||||| ||| |||||||| || || || || ||||| | | Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 158797 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158856 |||| ||| | | || || | |||||||| || || || | ||||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 158857 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158916 ||||||||||||| |||| ||| |||||||||| || || ||||||||||||||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 158917 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158976 | || |||||| | || || || || |||||||| || || || ||| ||||||||||| Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 158977 GAAGTCTCGTTACTTCCTCAC--TCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACT 159033 | | || || |||| | | || | ||||| || |||| || || || Sbjct 40968 GTTCCTTGGTAAC---CTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATG 40912 Query 159034 ATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACT 159093 | |||||||| || || ||||||| ||||| ||||||||||| || || |||||||| | Sbjct 40911 AAGGTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATT 40852 Query 159094 TCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCC 159153 | || || |||||||||||||| ||| ||||||||||| ||||| || |||||||||| Sbjct 40851 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCC 40792 Query 159154 TTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCAT 159213 | ||||| |||||||| | || |||||||||||||| | || | || ||||| | Sbjct 40791 TAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTT 40732 Query 159214 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 159273 ||||| | || |||||||| |||||||| ||| | ||||| |||| |||||||| | | Sbjct 40731 TCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTA 40672 Query 159274 ACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTA 159333 | || ||||| ||| | | |||||||| || |||||||||||||||||||| |||| Sbjct 40671 ATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 40612 Query 159334 ACGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 159370 | || ||||||||||| || ||||| ||||||| ||| Sbjct 40611 ATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 506 bits (560), Expect = 2e-138 Identities = 730/1024 (71%), Gaps = 12/1024 (1%) Strand=Plus/Minus Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958 ||||| || | || |||||| | |||| ||||| ||||| || || ||||| || Sbjct 31329 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGT 31270 Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018 || | || |||| ||| || ||||| | || |||||| | || || |||||||| Sbjct 31269 CTATTGCTCTTTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTT 31210 Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAAACTTTCT 160077 | ||| |||||||||||||||| | || || |||||| | || || ||||| ||| | Sbjct 31209 GTAACCTCCTGGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAA-CTTCTT 31151 Query 160078 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 160136 || || ||||| || || ||| | | | | |||||| || || || || |||| Sbjct 31150 AACCGCTGCAGTTTCTACCCCTGCTAATAGTTTAGCACATTCT-TTGTTGTTACTATGGG 31092 Query 160137 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 160196 ||||||| || ||||||||||| | ||| ||| | || || || |||| ||||| Sbjct 31091 GTCCTGAAGCGCAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 31032 Query 160197 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 160256 | || ||||| || || |||| ||||| || || ||| | ||||| |||||| | || | Sbjct 31031 TTGCTCTCCACGGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTC 30972 Query 160257 GTCTCATCGGTA----TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTC 160312 | ||| || | || ||||| ||||| || || || |||||||| |||||||| Sbjct 30971 G----ATCCGTGCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTT 30916 Query 160313 TTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCC 160372 ||||| |||||||| || || || | ||||| ||| ||||||| || || || Sbjct 30915 TTTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGT 30856 Query 160373 TTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACG 160432 ||||| || ||||| || ||| ||||| | |||| | ||||| ||||| || ||||| Sbjct 30855 TTTGGTGTAGCAGCTATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACA 30796 Query 160433 CTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCC 160492 || ||||| || ||||||||||||||||||||| || | || | || ||||| | || Sbjct 30795 CTGAACCCGTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCT 30736 Query 160493 ATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTT 160552 || ||||| | |||||| || || || | | |||||| || || |||||||| || Sbjct 30735 ATTCATGGTGCTACTGTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 30676 Query 160553 AAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTC 160612 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| Sbjct 30675 CGCGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTT 30616 Query 160613 TGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTG 160672 ||||| || ||||| || |||| ||||| || || || ||| | ||||| || ||||| Sbjct 30615 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 30556 Query 160673 TTTGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAAT 160732 ||||| || || | ||| | |||| | | |||| | | ||||| ||||| || Sbjct 30555 TTTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAAC 30496 Query 160733 CTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAG 160792 || ||||| || || ||||| ||| || || | ||||| |||||||| ||||||||| Sbjct 30495 CTGCGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAG 30436 Query 160793 ACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCC 160852 || ||||| ||||| || || || | |||||||| | ||||| ||| | || || Sbjct 30435 ACTTTCTATACCAAAAATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAA 30376 Query 160853 GACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTT 160912 || || || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||| Sbjct 30375 GATCAGCCTCATGAAAACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTT 30316 Query 160913 TAAT 160916 |||| Sbjct 30315 TAAT 30312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550857531848960