Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq98 565 3e-156 seq28 517 1e-141 >seq98 Length=41871 Score = 565 bits (626), Expect = 3e-156 Identities = 725/994 (73%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 ||||| | ||| |||| |||| | || ||| | || |||| ||||| ||||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | |||||| ||||| || || | |||||| | || || || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || ||||||||||| |||| || | | || |||||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 || || |||||||| || | || | ||| ||| || ||| | ||||| ||||| || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 |||||||| ||||| | ||||| ||| | || ||||| ||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | |||||| | | || | | || ||||| ||||||||||||||| || ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 | | |||||||| || ||||| ||||||||| || || || || || || || | || Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 || ||| | | || || | |||||||| || || || | ||||||| | || || Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 |||||||||||| |||| ||| |||||||||| || || |||||||||||||||||||| Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 || |||||| | || || || || |||||||| || || || ||| ||||||||| || Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | || || || | ||| || | ||||| || || | || || || | | Sbjct 40967 TTCCTTGGTAACCTCAA-GTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| || || || ||||||| || || ||||| ||||| || || ||||| || || | Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || ||||||||||||||||| || |||||||| || || || ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698 |||| ||||| || | || ||||||||||| ||| | || | || ||||| |||| Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758 || | || |||||||| |||||||| ||| | |||| ||||||| ||||| |||| | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818 | ||||| || | | |||||||| | |||||||||||||||||||| ||||| | Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 179819 CACACAACTTCCCACTCGACCTTGCTGCTGCTGA 179852 | ||||||||||| || ||||| ||||||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 517 bits (572), Expect = 1e-141 Identities = 707/982 (72%), Gaps = 4/982 (0%) Strand=Plus/Minus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| ||||| || || || ||||| || ||| | || |||| ||| || |||| Sbjct 31299 GACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTACTTTGCT 31240 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| ||||||| || ||||| ||||| || | || Sbjct 31239 TTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGGTATACCCATGGATTGGCC 31180 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 |||||| | ||||| ||| ||||| | || || || || || || |||||| | Sbjct 31179 AGCTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCTACCCCTGCTAATAG 31121 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | |||| ||||||||||| | || ||| |||| || || Sbjct 31120 TTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCAAGGGGATTTTACTCGTTG 31061 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || ||||||||||| || |||| ||||| || Sbjct 31060 GTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGAGCTTTCGGACTAATAGG 31001 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATC-CGTCCTTACAATGCTA 180408 |||||| |||| || |||||| | || || | || || || ||||| ||||| | Sbjct 31000 TTTTATGTTACGTCAATTTGAAATTGCTCGA-TCCGTGCAATTGCGACCTTATAATGCAA 30942 Query 180409 TTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTC 180468 | ||||| |||||||| || ||||| ||||| ||||| || || || || || |||| Sbjct 30941 TCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGTC 30882 Query 180469 AGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCT 180528 | ||| ||||||||||||| || |||||| |||||||| || ||| ||||| | || | Sbjct 30881 AATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTGT 30822 Query 180529 TTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTA 180588 || | || || || || || ||||| || ||||| || ||||||||||||||||||||| Sbjct 30821 TTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATATGATGGGAGTTGCTGGTG 30762 Query 180589 TACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATG 180648 || | || | || |||| | || || ||||| | ||||| || || || | | || Sbjct 30761 TATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTGTCGAAAATACTTTATTTG 30702 Query 180649 AAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTT 180708 |||| || || ||||| || || || ||| | |||| |||| || ||||||| Sbjct 30701 AAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAAGCCGAAGAAACTT 30642 Query 180709 ACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACA 180768 | || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || | Sbjct 30641 ATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATA 30582 Query 180769 AGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTA 180828 | || ||| | ||||| || ||||| ||||| || || | ||| |||||| | || Sbjct 30581 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTC 30522 Query 180829 TTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCA 180888 |||| | | ||||| ||||| ||||| ||||| || || ||||| ||| || ||| Sbjct 30521 TTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAAATCC 30462 Query 180889 GAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAG 180948 | ||||| ||||||||||| || ||||| ||||| ||||| || || || || ||||||| Sbjct 30461 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAATGAAG 30402 Query 180949 GACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAG 181008 | | ||||| ||| |||| || ||||| || || |||||| | || ||||| || | Sbjct 30401 GCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCCGAGG 30342 Query 181009 AAGTTCTACCAAGAGGTAACGC 181030 | |||||||| | || ||||| Sbjct 30341 AGGTTCTACCCCGTGGAAACGC 30320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608544294370560