Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq57780 116 5e-21 seq88758 105 9e-18 seq88759 100 4e-16 seq76781 91.5 2e-13 >seq57780 Length=6884 Score = 116 bits (128), Expect = 5e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | |||||||||||| | |||| ||||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 || || | |||||||| ||| ||||||||| || | || || ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 |||||||||||||| || ||| || | |||||| |||| || ||||| || Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 || || || ||||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq88758 Length=3554 Score = 105 bits (116), Expect = 9e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 |||||| |||||||||| || ||||| || |||||||||||| || || | |||| Sbjct 1023 AGTTCCGGCATTAAATAGAGTGGGAGAAGCATGAGTGAACCATCGTTGGGACATTAGATG 964 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||||||| |||||||| || | || | ||||||||| | || || | |||||| Sbjct 963 GTATGTTCTGATAGCTGAATCAACGTCATCTTTATGAATTCCAACAGCAACCCTCATCAA 904 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| || ||||| | ||||| ||| | | |||| |||||||| |||| || Sbjct 903 CATGTGTTGAGGCCTCTCTACAACTTTTCCCTGAACCTTCAGGAGGTATGACCTTTCAAG 844 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || || || ||||| || | ||| |||||| || || || || || Sbjct 843 GGTCTTGAAGCCAAAGTAATCATATTCAAAGTCCCTATCATAGATGAT 796 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | || |||| ||| | || | | ||| |||| ||| ||| Sbjct 1351 CCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCCA 1292 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || ||| | || || |||||| ||||||||| || | || || |||||| || || Sbjct 1291 TTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGAA 1232 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || ||| ||| | ||||| ||||| || ||||||||| Sbjct 1231 ACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATATA 1172 Query 69931 CCCTCTATGCTATCATCTATCATG 69954 || || || ||||||||| ||||| Sbjct 1171 CCATCGATACTATCATCTTTCATG 1148 >seq88759 Length=3029 Score = 100 bits (110), Expect = 4e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 |||||| |||||||||| |||||||| || |||||||||||| | ||| | |||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||||||| |||| | || || ||||| | |||||||| | || || | ||||| Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| || ||||||| ||||| ||| | | |||| ||||| || ||| || Sbjct 769 CATGTGTTGAGGTCTCTCTACAACTTTTCCCTGAACCTTCAGTAGGTAGGACCGTTCAAG 710 Query 70170 AGTTTTAAACCCAAAATA 70187 ||||| |||||||| || Sbjct 709 GGTTTTGAACCCAAAGTA 692 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||||||||| || || || || ||| ||||| | |||||| |||| |||| || Sbjct 1717 CTCTTTTTCATAATGGGTGTACAGTTCTTCAAATTCTTTGCCCCAACAATCAGCCAAACC 1658 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||| ||||| ||||| | |||||||| ||| | | ||||| | |||||| Sbjct 1657 AGGTGCCTCATTAGGACAGAATAATGACCAGTACCCATTACTTTGAACTCTCTCCATAAA 1598 Query 69609 TAGATCGGGAATCCAAAGAGC 69629 ||||||||| | ||||||||| Sbjct 1597 TAGATCGGGTACCCAAAGAGC 1577 >seq76781 Length=7328 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || |||||||| || || |||||||||||| |||||||| || || ||||| | Sbjct 5574 GCAAGCAAAGTCACAGTGCAGCCCCTCATCTCTAGATATTAATTCATTTGAGAATGTCAA 5633 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCA 39715 || ||||| ||||| | |||||| |||||||| |||||| Sbjct 5634 ACCTGGCATCAGACCCCTCTTTTTAAGCCAAAAAATGGCA 5673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684899488723680