Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq27324 114 2e-20 seq101798 84.2 3e-11 seq88759 84.2 3e-11 >seq27324 Length=1540 Score = 114 bits (126), Expect = 2e-20 Identities = 229/336 (68%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 11483 TCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAG 11542 ||||| ||||| | | ||||| || ||||| || | ||||||||| | | ||||| Sbjct 1210 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATAATGCCAGTGTTACCCTCAAAA 1269 Query 11543 CCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATA 11602 |||||||| || || | | || |||| ||| || ||||| || |||||| | | | Sbjct 1270 CCATCCATTTCTGTTAAAAGCTGGTTAAGTGTCTGCTCTCTTTCGTCATTTCC---CCCA 1326 Query 11603 CCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACAT 11659 ||| |||| | | ||| | || || |||||||| ||||||| || ||||| ||| Sbjct 1327 CCAATTCCAGTTCCTCTTTGTCTACCAACAGCATCAATTTCATCAACAAACACAATGCAT 1386 Query 11660 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACA 11719 || ||| || || | | || ||||| | || | ||||| ||||||||| Sbjct 1387 GGGGCATTATCCTTAGCTTTCTTGAAAAGATCCCTGACTCGAGAAGCACCAACACCAACA 1446 Query 11720 AACATCTCCACAAAGTTTGCGGCAGAGCACTGG--ATGAATGGGACATTTGATTCACCCG 11777 |||||||| ||||| | | |||| | ||| | |||||| ||| | |||||| | Sbjct 1447 AACATCTCAACAAACTCAGAACCAGA--AATGGAAAAGAATGGAACACCAGCTTCACCAG 1504 Query 11778 CGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTG 11813 | || || ||| || || |||||||| || |||| Sbjct 1505 CAATCGCCTTGGCTAGAAGAGTCTTTCCAGTTCCTG 1540 >seq101798 Length=623 Score = 84.2 bits (92), Expect = 3e-11 Identities = 238/363 (66%), Gaps = 2/363 (1%) Strand=Plus/Minus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| | || || | ||| || || |||||| || || |||||| || || ||| Sbjct 374 TCAAATCTTCCTGGTCTAAGCAGAGCAGAATCAAGTATTTCAGGGCGATTTGTAGCAGCA 315 Query 11513 ATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATT 11572 || || | | ||| | | | ||| |||||||| || || || || || || | Sbjct 314 ATGACAATCACTCCACTGTTACCACTAAAACCATCCATTTCAGTCAGCAACTGGTTTAGC 255 Query 11573 GTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCA 11632 || ||||| ||||||||||| || | ||||| | | ||| | ||||| || Sbjct 254 GTCTGTTCCCTCTCATCATTCCCTCCACCAATACCAGTTCCTCTCTGCCTTCCCACAGCG 195 Query 11633 TCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCG 11692 ||||||||||| || || || | |||||| |||| | ||| | | || | || Sbjct 194 TCAATCTCATCGATAAACACCAGACATGGAGCATTTGCCTTGGCCTTGTTGAACAAGTCC 135 Query 11693 CGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG- 11751 | || ||| || |||||||||||||||||||| | || | || | || || || Sbjct 134 CTCACTCTTGAAGCCCCCACACCAACAAACATCTCGATGAACTCTGATCCTGA-CAGTGA 76 Query 11752 GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACC 11811 | ||| || || | | ||| || || || || ||| || | |||||| || || || Sbjct 75 AAAGAAAGGAACTTCAGCTTCTCCAGCTATTGCCTTGGCTAGCAAGGTCTTCCCAGTCCC 16 Query 11812 TGG 11814 ||| Sbjct 15 TGG 13 >seq88759 Length=3029 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| || || |||||||||||||| || ||||| || || | ||| ||||| | Sbjct 2151 TGGTAGAGCAATTGATGCCAAATTACACACAGCAGTTTCTGTTGGACTTGTATACTCAAT 2092 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||| || ||||| || || ||| ||||| || |||||||||| ||||||||||| | Sbjct 2091 AATCTCCGTACACAAATTTGAAGATTTAATGGTGCCCAAATTCTGCTGGTTACTCTTTCT 2032 Query 111349 GTTGCACGCATCCT 111362 ||||| | ||||| Sbjct 2031 ATTGCAAGAATCCT 2018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626194912195200