Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq27324 132 6e-26 seq101798 98.7 1e-15 >seq27324 Length=1540 Score = 132 bits (146), Expect = 6e-26 Identities = 235/336 (70%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| ||||| | | || || || || ||||||| ||| || || | | |||||| Sbjct 1210 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATAATGCCAGTGTTACCCTCAAAA 1269 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||| ||||| ||||||| || || || | ||| ||||| | | | Sbjct 1270 CCATCCATTTCTGTTAAAAGCTGGTTAAGTGTCTGCTCTCTTTCGTCATT---TCCCCCA 1326 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| |||| | | ||| | || || |||||||| ||||||| || || |||||| Sbjct 1327 CCAATTCCAGTTCCTCTTTGTCTACCAACAGCATCAATTTCATCAACAAACACAATGCAT 1386 Query 9734 GGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 || ||| || ||| ||| ||| ||||||| || || || || |||||||| Sbjct 1387 GGGGCATTATCCTTAGCTTTCTTGAAA-AGATCCCTGACTCGAGAAGCACCAACACCAAC 1445 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | | | ||| || | | ||| || ||| || |||||| | Sbjct 1446 AAACATCTCAACAAACTCAGAACCAGAA-ATGGAAAAGAATGGAACACCAGCTTCACCAG 1504 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTG 9887 |||| || ||| ||||||||||| || || |||| Sbjct 1505 CAATCGCCTTGGCTAGAAGAGTCTTTCCAGTTCCTG 1540 >seq101798 Length=623 Score = 98.7 bits (108), Expect = 1e-15 Identities = 247/367 (67%), Gaps = 10/367 (3%) Strand=Plus/Minus Query 9527 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9586 ||||| | ||||| | ||| || || |||||| || ||| |||||| || || || Sbjct 374 TCAAATCTTCCTGGTCTAAGCAGAGCAGAATCAAGTATTTCAGGGCGATTTGTAGCAGCA 315 Query 9587 ATGACAA-CAATAC-CTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9644 ||||||| || | | ||||| | | |||||||||||| || |||| | ||||| | Sbjct 314 ATGACAATCACTCCACTGTTACC--ACTAAAACCATCCATTTCAGTCAGCAACTGGTTTA 257 Query 9645 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGG 9704 || ||||||| ||||||||| || | ||||| | | ||| ||||||| | Sbjct 256 GCGTCTGTTCCCTCTCATCATTCCCTCCACCAATACCAGTTCCTCTCTGCCTTCCCACAG 197 Query 9705 CATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGAT 9764 | ||||||||||| || || || | ||||| |||| | || | || | | Sbjct 196 CGTCAATCTCATCGATAAACACCAGACATGGAGCATTTGCCTTGGCCTTGTTGAACAAGT 137 Query 9765 CCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 9822 ||| ||| |||| || |||||||||||||||||||| | || | || | | ||| Sbjct 136 CCC--TCACTCTTGAAGCCCCCACACCAACAAACATCTCGATGAACTCTGATCCTG-ACA 80 Query 9823 TTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 || | ||| || || | || ||| || || || || ||| || | ||||| || | Sbjct 79 GTGAAAAGAAAGGAACTTCAGCTTCTCCAGCTATTGCCTTGGCTAGCAAGGTCTTCCCAG 20 Query 9882 TACCTGG 9888 | ||||| Sbjct 19 TCCCTGG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581554674670880