Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq76495 187 3e-42
seq143273 181 1e-40
seq128449 179 4e-40
seq30058 120 3e-22
seq18136 109 6e-19
seq30782 89.7 6e-13
>seq76495
Length=1287
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| |||||||| || || || || ||||| | ||||| |||
Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| ||| |||| |||||||| || |||||||| || ||||| ||||||||
Sbjct 485 TGATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 544
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || |||||||||||||| || ||||||| |||||| | || ||||| ||
Sbjct 545 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAA 604
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| |||||||| ||||| ||| | ||||| || |||||
Sbjct 605 CATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCTCCGTGGTGG 652
Score = 150 bits (166), Expect = 2e-31
Identities = 172/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT- 27465
||||||| ||||||||||| || || || || || || ||| | ||||||||| || |
Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAG--AGCTC 256
Query 27466 -GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| ||||||| || || ||||||||||| || || || ||||||||
Sbjct 257 CGACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCA 316
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | ||||||||||| |||||||| || |||| | | || || | ||||| ||
Sbjct 317 GCAGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAA 376
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| |||||| | || | ||||| | || |||||||| || || |||
Sbjct 377 CATTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGGA 425
>seq143273
Length=304
Score = 181 bits (200), Expect = 1e-40
Identities = 174/221 (79%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| ||||| || || || || || ||||| | |||||||| ||
Sbjct 85 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAA--AGC 142
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| |||| |||| ||| ||||||| ||||| || |||||||| || ||||| || |||
Sbjct 143 TCGGATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGAC 202
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||| | || || || ||||||||||| || ||||||| |||||||| |||||||||
Sbjct 203 CAGCAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGATGGACGTACCCTGGCAGACTAT 262
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|| |||||||||| |||||||| ||||| ||| | |||||
Sbjct 263 AACATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCT 303
>seq128449
Length=764
Score = 179 bits (198), Expect = 4e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || || || |||||||| || || | ||||| ||| |
Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || ||||| || |||||||| || || |||||||||
Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | |||||||||||||| ||||| || ||||||| || ||||| || ||||||||
Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||| ||| | ||| | || | ||||| || |||||
Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGTGCTCCGTCTCCGTGGTGG 428
Score = 158 bits (174), Expect = 1e-33
Identities = 143/178 (80%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGT--GATAGCATTGCAAATTTGAAGGCTA 27490
|| || || || ||| | ||||||||| || | || | ||||| ||| ||||||| |
Sbjct 1 GGAAAAACCATCACTTTGGAGGTTGAG--AGCTCAGACACCATTGATAATGTGAAGGCCA 58
Query 27491 AAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGC 27550
|||||||||| ||||| ||||| || || ||||||||| | || ||||||||||| ||||
Sbjct 59 AAATTCAGGATAAGGAAGGAATCCCACCGGACCAGCAGAGGCTCATTTTTGCTGGCAAGC 118
Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||||| |||||||| || || || ||| ||||||||||||||||||| ||
Sbjct 119 AACTAGAGGATGGCCGTACCCTTGCTGATTACAATATCCAAAAGGAATCCACTCTCCA 176
Score = 104 bits (114), Expect = 3e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || ||||| ||||| || ||| | || || || |
Sbjct 430 ATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTCT 489
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||||| || || ||||||||||| ||||| || || ||||||
Sbjct 490 GACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCAG 549
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| || ||||| || || |||| | || | || ||||| ||
Sbjct 550 CAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAAC 609
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || || || | || | || || || |||||
Sbjct 610 ATTCAAAAGGAGTCTACACTCCACTTGGTGCTTCGCCTGCGTGGTGG 656
>seq30058
Length=4835
Score = 120 bits (132), Expect = 3e-22
Identities = 123/159 (77%), Gaps = 4/159 (3%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || |||||||| |||||||| || ||||| || || || |
Sbjct 162 ATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAA--AGTT 105
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| ||| | |||||||| || |||||||||||||| ||||| ||||| |
Sbjct 104 CCGACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATC 45
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
| || | || || ||||| || |||||||| || ||||
Sbjct 44 AACAAAGGCTCATCTTTGCCGGCAAGCAACTTGAAGATG 6
>seq18136
Length=774
Score = 109 bits (120), Expect = 6e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555
||||||||||| ||||| ||||||||||||||| | || ||||| || || ||||| ||
Sbjct 521 CAGGACAAGGAAGGAATCCCTCCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTG 580
Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
||||||| || || || || ||||| || |||| || || || || |||||||| ||
Sbjct 581 GAGGATGGCCGAACTCTCGCTGACTACAACATCCAGAAAGAGTCAACACTTCATCTGGTT 640
Query 27616 TTGCGTCTTCGCGGTGGA 27633
||| | ||| | || |||
Sbjct 641 TTGAGGCTTAGGGGAGGA 658
>seq30782
Length=5251
Score = 89.7 bits (98), Expect = 6e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || | || || ||||||||||| || ||||| || || ||
Sbjct 3107 ATGCAGATCTTCGTGAAAACTTTGACGGGGAAGACTATTACACTCGAGGTCGAATCGAGT 3048
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512
|||| |||| ||| |||||||||| || |||||||||||||| ||
Sbjct 3047 GATACTATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTAT 3001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568642156533440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |