Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq76495 187 3e-42 seq143273 181 1e-40 seq128449 179 4e-40 seq30058 120 3e-22 seq18136 109 6e-19 seq30782 89.7 6e-13 >seq76495 Length=1287 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| |||||||| || || || || ||||| | ||||| ||| Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| |||| |||||||| || |||||||| || ||||| |||||||| Sbjct 485 TGATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 544 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || |||||||||||||| || ||||||| |||||| | || ||||| || Sbjct 545 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAA 604 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| |||||||| ||||| ||| | ||||| || ||||| Sbjct 605 CATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCTCCGTGGTGG 652 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT- 27465 ||||||| ||||||||||| || || || || || || ||| | ||||||||| || | Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAG--AGCTC 256 Query 27466 -GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| ||||||| || || ||||||||||| || || || |||||||| Sbjct 257 CGACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCA 316 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | ||||||||||| |||||||| || |||| | | || || | ||||| || Sbjct 317 GCAGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAA 376 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||| | || | ||||| | || |||||||| || || ||| Sbjct 377 CATTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGGA 425 >seq143273 Length=304 Score = 181 bits (200), Expect = 1e-40 Identities = 174/221 (79%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || || || || || ||||| | |||||||| || Sbjct 85 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAA--AGC 142 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| ||||||| ||||| || |||||||| || ||||| || ||| Sbjct 143 TCGGATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGAC 202 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| | || || || ||||||||||| || ||||||| |||||||| ||||||||| Sbjct 203 CAGCAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGATGGACGTACCCTGGCAGACTAT 262 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 || |||||||||| |||||||| ||||| ||| | ||||| Sbjct 263 AACATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCT 303 >seq128449 Length=764 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || |||||||| || || | ||||| ||| | Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||| || ||||| || |||||||| || || ||||||||| Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | |||||||||||||| ||||| || ||||||| || ||||| || |||||||| Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||| | ||| | || | ||||| || ||||| Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGTGCTCCGTCTCCGTGGTGG 428 Score = 158 bits (174), Expect = 1e-33 Identities = 143/178 (80%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGT--GATAGCATTGCAAATTTGAAGGCTA 27490 || || || || ||| | ||||||||| || | || | ||||| ||| ||||||| | Sbjct 1 GGAAAAACCATCACTTTGGAGGTTGAG--AGCTCAGACACCATTGATAATGTGAAGGCCA 58 Query 27491 AAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGC 27550 |||||||||| ||||| ||||| || || ||||||||| | || ||||||||||| |||| Sbjct 59 AAATTCAGGATAAGGAAGGAATCCCACCGGACCAGCAGAGGCTCATTTTTGCTGGCAAGC 118 Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||||| |||||||| || || || ||| ||||||||||||||||||| || Sbjct 119 AACTAGAGGATGGCCGTACCCTTGCTGATTACAATATCCAAAAGGAATCCACTCTCCA 176 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || ||||| ||||| || ||| | || || || | Sbjct 430 ATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTCT 489 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || ||||||||||| ||||| || || |||||| Sbjct 490 GACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCAG 549 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| || ||||| || || |||| | || | || ||||| || Sbjct 550 CAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAAC 609 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || || || | || | || || || ||||| Sbjct 610 ATTCAAAAGGAGTCTACACTCCACTTGGTGCTTCGCCTGCGTGGTGG 656 >seq30058 Length=4835 Score = 120 bits (132), Expect = 3e-22 Identities = 123/159 (77%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || |||||||| |||||||| || ||||| || || || | Sbjct 162 ATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAA--AGTT 105 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | |||||||| || |||||||||||||| ||||| ||||| | Sbjct 104 CCGACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATC 45 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 | || | || || ||||| || |||||||| || |||| Sbjct 44 AACAAAGGCTCATCTTTGCCGGCAAGCAACTTGAAGATG 6 >seq18136 Length=774 Score = 109 bits (120), Expect = 6e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 ||||||||||| ||||| ||||||||||||||| | || ||||| || || ||||| || Sbjct 521 CAGGACAAGGAAGGAATCCCTCCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTG 580 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 ||||||| || || || || ||||| || |||| || || || || |||||||| || Sbjct 581 GAGGATGGCCGAACTCTCGCTGACTACAACATCCAGAAAGAGTCAACACTTCATCTGGTT 640 Query 27616 TTGCGTCTTCGCGGTGGA 27633 ||| | ||| | || ||| Sbjct 641 TTGAGGCTTAGGGGAGGA 658 >seq30782 Length=5251 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || ||||||||||| || ||||| || || || Sbjct 3107 ATGCAGATCTTCGTGAAAACTTTGACGGGGAAGACTATTACACTCGAGGTCGAATCGAGT 3048 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 |||| |||| ||| |||||||||| || |||||||||||||| || Sbjct 3047 GATACTATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTAT 3001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568642156533440