Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq128449 114 8e-21 seq215049 113 3e-20 seq76495 102 5e-17 seq87537 96.9 2e-15 seq30058 82.4 5e-11 >seq128449 Length=764 Score = 114 bits (126), Expect = 8e-21 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| | ||| |||||||| |||||||| || | ||| || ||| Sbjct 419 AGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGC 360 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || ||||| |||| | ||| ||||| || || | |||||| Sbjct 359 CCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCC 300 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||||| | || || || ||| ||||| |||||||| |||| ||| Sbjct 299 TTATCTTGAATCTTG-GCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGT 241 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || | |||||||||||||| |||||| Sbjct 240 GATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCATG 201 Score = 114 bits (126), Expect = 8e-21 Identities = 161/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | |||||| ||||| || ||||||||||||||| || || | | ||| | Sbjct 647 AGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTT 588 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || ||||||||||| | | || ||||| || || | ||| ||| Sbjct 587 CCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCC 528 Query 34609 TTGT-CTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666 |||| |||| ||| || | ||||| | |||||||| ||| || ||||||| | Sbjct 527 TTGTCCTGT-ATC-TTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAG 470 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || || || ||||| | || |||||||||||||||||| Sbjct 469 TGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCATG 429 >seq215049 Length=488 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||||||||| |||||| ||||| || || || | |||||| || | || ||| Sbjct 10 ACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCA 69 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| || | | ||||| || || || | |||||||| || | Sbjct 70 AGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGG 129 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| |||| || || || |||||| ||| ||||| || |||| || || ||||| Sbjct 130 ATC-TTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTTT 188 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | || ||||||||||| |||||| Sbjct 189 TCCCGTGAGGGTCTTCACAAAAATTTGCATG 219 >seq76495 Length=1287 Score = 102 bits (112), Expect = 5e-17 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || | || |||||||||||| || || ||| || | Sbjct 415 AGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGACAAGAGTCCTA 356 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||||||||| || || ||||| || || | ||| ||||| || || | || ||| Sbjct 355 CCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCC 296 Query 34609 TTGT-CTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666 |||| |||| ||| |||| || || | ||| ||||| |||||| || |||| | Sbjct 295 TTGTCCTGT-ATC-TTTGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAG 238 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCA 34705 | || ||||| || || | || || |||||||| |||| Sbjct 237 TGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq87537 Length=233 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 34518 CTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATAT 34577 ||| || |||||||| || | ||| || ||| | ||||| || || || || ||||| || Sbjct 233 CTTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGAT 174 Query 34578 TAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA- 34636 | | || ||||||||||| | || ||||| || |||| || | |||||| || Sbjct 173 CAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATC-TTGGCTTTAACATTAT 115 Query 34637 AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAA 34696 ||| || || ||||||||| || | || || || || || |||| |||||||||| Sbjct 114 CAATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCACAA 55 Query 34697 AAATCTGCAT 34706 | |||||||| Sbjct 54 AGATCTGCAT 45 >seq30058 Length=4835 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 ||||||||||| || |||||||| || | | ||||| || || || | ||||||||| Sbjct 8 TCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACCCTCCTTG 67 Query 34612 TCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATC 34671 || |||||| |||| ||| ||||| || |||||||| | |||||| Sbjct 68 TCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAGGGTTATA 127 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || ||||| | ||||||||||| || ||||| Sbjct 128 GTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313831984492796