Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq128449 114 1e-20
seq76495 111 1e-19
seq30058 100 2e-16
>seq128449
Length=764
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||||||| ||| | || ||| | ||||| ||| ||
Sbjct 429 CATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTC 488
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | || || || || || ||||| ||||| || ||||| || ||
Sbjct 489 TGACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCA 548
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| | | |||| |||||||| || | ||||| | ||| | |||| |||||
Sbjct 549 GCAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAA 608
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||||||| || | || ||||| | || |||| ||||||||
Sbjct 609 CATTCAAAAGGAGTCTACACTCCACTTGGTGCTTCGCCTGCGTGGTGGCAT 659
>seq76495
Length=1287
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048
|||| || ||||| || ||||| || || || | || ||| | || || || ||||
Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCG 258
Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108
|| | ||||| | || || ||| || || ||||| |||||||| ||||| || || |
Sbjct 259 ACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAGC 318
Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168
|| | || || | || || || ||| | ||||| || ||| || ||| |||||||
Sbjct 319 AGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAACA 378
Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| |||| || | || ||||| |||||| |||| || || ||
Sbjct 379 TTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGGAAT 427
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || ||||| || || | ||||| | || ||||| ||
Sbjct 426 ATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTCT 485
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||| |||||||| |||||||| || || || ||
Sbjct 486 GATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 545
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || |||| || | ||| | | || ||||||
Sbjct 546 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAAC 605
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || | ||| | || | ||| | || |||||
Sbjct 606 ATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCTCCGTGGTGG 652
>seq30058
Length=4835
Score = 100 bits (110), Expect = 2e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| |||||||| ||||| ||| |||| || |||||||||||| |||
Sbjct 162 ATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAAAGTTCC 103
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || || || ||||||
Sbjct 102 GACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAA 43
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
|| | | || | |||||||| ||| | |||||
Sbjct 42 CAAAGGCTCATCTTTGCCGGCAAGCAACTTGAAGA 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433681194354716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |