Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq128449 114 1e-20 seq76495 111 1e-19 seq30058 100 2e-16 >seq128449 Length=764 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||||||| ||| | || ||| | ||||| ||| || Sbjct 429 CATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTC 488 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || ||||| ||||| || ||||| || || Sbjct 489 TGACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCA 548 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | | |||| |||||||| || | ||||| | ||| | |||| ||||| Sbjct 549 GCAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAA 608 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||| || | || ||||| | || |||| |||||||| Sbjct 609 CATTCAAAAGGAGTCTACACTCCACTTGGTGCTTCGCCTGCGTGGTGGCAT 659 >seq76495 Length=1287 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048 |||| || ||||| || ||||| || || || | || ||| | || || || |||| Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCG 258 Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108 || | ||||| | || || ||| || || ||||| |||||||| ||||| || || | Sbjct 259 ACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAGC 318 Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168 || | || || | || || || ||| | ||||| || ||| || ||| ||||||| Sbjct 319 AGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAACA 378 Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| |||| || | || ||||| |||||| |||| || || || Sbjct 379 TTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGGAAT 427 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || ||||| || || | ||||| | || ||||| || Sbjct 426 ATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTCT 485 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| |||||||| |||||||| || || || || Sbjct 486 GATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 545 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || |||| || | ||| | | || |||||| Sbjct 546 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAAC 605 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | ||| | || | ||| | || ||||| Sbjct 606 ATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCTCCGTGGTGG 652 >seq30058 Length=4835 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| |||||||| ||||| ||| |||| || |||||||||||| ||| Sbjct 162 ATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAAAGTTCC 103 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| || || || || || |||||| Sbjct 102 GACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAA 43 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || | | || | |||||||| ||| | ||||| Sbjct 42 CAAAGGCTCATCTTTGCCGGCAAGCAACTTGAAGA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433681194354716