Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq98 518 4e-142
seq85 129 7e-25
>seq98
Length=41871
Score = 518 bits (574), Expect = 4e-142
Identities = 694/958 (72%), Gaps = 8/958 (1%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | | || || | | |||
Sbjct 41532 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 41474
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| | || || ||||| || || || || ||||| || |||||||| ||||| ||
Sbjct 41473 TTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTT 41414
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| |||||| |||| || |||||||| || || || || || | | || | || |
Sbjct 41413 TCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCC 41354
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || | ||||| |||||||| |||||||| ||| | ||||| |||||| | |||
Sbjct 41353 GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATAC 41294
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
|| || || || || |||| |||| | |||||| | | ||| | | |||||||
Sbjct 41293 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 41234
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||||||||||| | | | || ||||| |||||||| |||||||||
Sbjct 41233 GGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 41174
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | ||||| | || || ||| | | || ||| | |||||||||
Sbjct 41173 TCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGC 41114
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| || || ||||||||| | || || || ||||| |||||||||||| ||||||||||
Sbjct 41113 TTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAG 41054
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| ||||||||||| || ||||||||||| |||||| | || ||||| ||||| || ||
Sbjct 41053 GCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGC 40994
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCA--CTTG-TTAGAGAG 176742
|| || || ||| || ||||| || |||| || | ||| ||| | || ||
Sbjct 40993 GGCTCCCTATTCAGTGCTATGCATGG-TTCCTTGGTA--ACCTCAAGTTTGATCAGGGAA 40937
Query 176743 ACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATAC 176802
|| || ||||| ||||| || | ||||||||||| || ||||||| || || ||
Sbjct 40936 ACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTAT 40877
Query 176803 AACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAAT 176862
|| || ||||| || || ||||| ||||| || | |||||||| |||||| ||||||
Sbjct 40876 AATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAAC 40817
Query 176863 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACT 176922
||||| | | ||||||||||| || || | || || | | |||||||| ||
Sbjct 40816 AACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACC 40757
Query 176923 GCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 176982
|| | ||| || |||| ||||| |||||| | || |||||||| |||||||| || ||
Sbjct 40756 GCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTA 40697
Query 176983 TTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTT 177042
| || | ||| || ||| ||| |||| ||||| | |||||||| ||||||
Sbjct 40696 GTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTT 40637
Query 177043 GGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100
||||||||||||||||| || |||||||||||||||||||| || ||||| |||||||
Sbjct 40636 GGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 40579
>seq85
Length=15593
Score = 129 bits (142), Expect = 7e-25
Identities = 193/272 (71%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||| ||||| | || |||||||| || ||| | || | || ||| | | ||| |||||
Sbjct 11698 ACCGGTAACTATTCAATATCCTTATGAAAAATTAATCACATCCGAGCGGTTCCGCGGTCG 11639
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
|| || | || ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 11638 AATCCATTTCGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGCGTATGTCCTAT 11579
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAGAAGAAAGAACTTAGA-- 19472
||||||| || || |||||| || | ||| |||| | ||| | | |
Sbjct 11578 AGATCTACCTGTTGTAGATTGGAAATTGGA--AACGGACATTCGAAAAAAACGGTTGTTT 11521
Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532
||||| || || || ||| ||||| || || || |||||||| ||||||||||||
Sbjct 11520 AATTACAGTATTGATTTCGGAATCTGTATATTTTGTGGCAACTGCGTTGAGTATTGCCCA 11461
Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGA 19564
||||| ||| |||| ||||| |||||||||||
Sbjct 11460 ACAAATTGTTTATCAATGACTGAAGAATATGA 11429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 601729088355840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |