Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq98 518 4e-142 seq85 129 7e-25 >seq98 Length=41871 Score = 518 bits (574), Expect = 4e-142 Identities = 694/958 (72%), Gaps = 8/958 (1%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | | || || | | ||| Sbjct 41532 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 41474 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || || ||||| || |||||||| ||||| || Sbjct 41473 TTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCCGTT 41414 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | |||||| |||| || |||||||| || || || || || | | || | || | Sbjct 41413 TCTGGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCC 41354 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || | ||||| |||||||| |||||||| ||| | ||||| |||||| | ||| Sbjct 41353 GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATAC 41294 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 || || || || || |||| |||| | |||||| | | ||| | | ||||||| Sbjct 41293 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 41234 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | | | || ||||| |||||||| ||||||||| Sbjct 41233 GGCCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 41174 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | ||||| | || || ||| | | || ||| | ||||||||| Sbjct 41173 TCAGCTCCTGTTGCAGCAGCTACCGCTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGC 41114 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || || || ||||||||| | || || || ||||| |||||||||||| |||||||||| Sbjct 41113 TTTTCGGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAG 41054 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || ||||||||||| || ||||||||||| |||||| | || ||||| ||||| || || Sbjct 41053 GCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGCGTAGCGGGTGTATTCGGC 40994 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCA--CTTG-TTAGAGAG 176742 || || || ||| || ||||| || |||| || | ||| ||| | || || Sbjct 40993 GGCTCCCTATTCAGTGCTATGCATGG-TTCCTTGGTA--ACCTCAAGTTTGATCAGGGAA 40937 Query 176743 ACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATAC 176802 || || ||||| ||||| || | ||||||||||| || ||||||| || || || Sbjct 40936 ACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGGGGAAACTTAT 40877 Query 176803 AACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAAT 176862 || || ||||| || || ||||| ||||| || | |||||||| |||||| |||||| Sbjct 40876 AATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAAC 40817 Query 176863 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACT 176922 ||||| | | ||||||||||| || || | || || | | |||||||| || Sbjct 40816 AACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAATAGGTATCTGGTTCACC 40757 Query 176923 GCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 176982 || | ||| || |||| ||||| |||||| | || |||||||| |||||||| || || Sbjct 40756 GCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTA 40697 Query 176983 TTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTT 177042 | || | ||| || ||| ||| |||| ||||| | |||||||| |||||| Sbjct 40696 GTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTT 40637 Query 177043 GGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 ||||||||||||||||| || |||||||||||||||||||| || ||||| ||||||| Sbjct 40636 GGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 40579 >seq85 Length=15593 Score = 129 bits (142), Expect = 7e-25 Identities = 193/272 (71%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||| ||||| | || |||||||| || ||| | || | || ||| | | ||| ||||| Sbjct 11698 ACCGGTAACTATTCAATATCCTTATGAAAAATTAATCACATCCGAGCGGTTCCGCGGTCG 11639 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || || | || ||||| || || || || ||||| || ||||| | ||||| ||||| Sbjct 11638 AATCCATTTCGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGCGTATGTCCTAT 11579 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAGAAGAAAGAACTTAGA-- 19472 ||||||| || || |||||| || | ||| |||| | ||| | | | Sbjct 11578 AGATCTACCTGTTGTAGATTGGAAATTGGA--AACGGACATTCGAAAAAAACGGTTGTTT 11521 Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532 ||||| || || || ||| ||||| || || || |||||||| |||||||||||| Sbjct 11520 AATTACAGTATTGATTTCGGAATCTGTATATTTTGTGGCAACTGCGTTGAGTATTGCCCA 11461 Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGA 19564 ||||| ||| |||| ||||| ||||||||||| Sbjct 11460 ACAAATTGTTTATCAATGACTGAAGAATATGA 11429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601729088355840