Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq143273 163 7e-35 seq76495 140 8e-28 seq128449 136 9e-27 seq215049 132 1e-25 seq87537 123 6e-23 seq802 102 2e-16 seq16 100 7e-16 seq158123 93.3 1e-13 seq18136 93.3 1e-13 >seq143273 Length=304 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| || |||||||| || ||||||| || || || |||| || | ||||| Sbjct 297 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCC 238 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||||||||| |||| ||| ||||| || |||||||||||||||||| Sbjct 237 TCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCT 178 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||||||| || || || || ||| |||| || || ||||| || || Sbjct 177 TGGATTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAACGTAATGGTT 118 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||| ||| || | || | |||||| Sbjct 117 TTACCAGTCAGAGTCTTCACAAAGATCTGCATT 85 >seq76495 Length=1287 Score = 140 bits (154), Expect = 8e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| || |||||||| || ||||||| ||||| || ||||| || | |||||| Sbjct 637 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCC 578 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | | || ||||| || ||||| |||||||||||| Sbjct 577 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 518 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || |||||| || || || || ||| | ||||| || || || || || Sbjct 517 TGGAT-TTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGGT 459 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||| || || | || | |||||| Sbjct 458 TTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 Score = 116 bits (128), Expect = 9e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 ||||| | ||||| ||| | | ||| || |||||||| || ||||||||||| || || Sbjct 385 TTTTGAATGTTGTAGTCGACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATC 326 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | | || ||||| || || || ||||||||||| || |||||| ||||||| || Sbjct 325 AACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCA 266 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 |||||||| ||| | || || || || ||||| || || ||||| | ||| || | || Sbjct 265 ATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAA 206 Query 225706 ACTTGCA 225712 | ||||| Sbjct 205 ATTTGCA 199 >seq128449 Length=764 Score = 136 bits (150), Expect = 9e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || || || ||||| | ||||| |||||||| || || |||||| Sbjct 641 AGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCATCT 582 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || | ||| ||||| || || || ||||||||||| Sbjct 581 TCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTGTCC 522 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||| ||| |||| || || || ||||| ||| Sbjct 521 TGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAGTGATTGTC 462 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 461 TTTCCGGTCA 452 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || || || | ||||||||||||||| ||||||| ||||||||| || | || Sbjct 195 ACGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGT 136 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| ||||| ||||| ||||| || || || | || ||||| || || || || Sbjct 135 ACGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCC 76 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || || || ||||||| || |||||||||||| | || || || || Sbjct 75 TTCCTTATCCTGAATTTTGGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCCAA 16 Query 225672 CGTGATCGTCTTGCC 225686 ||||| || || || Sbjct 15 AGTGATGGTTTTTCC 1 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||| ||||||| || || || || | || | |||||| ||||||||||| || Sbjct 399 AGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCCATCCTCTAGCTGCTTGCC 340 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||| || || || | || ||||| || || || || ||||| ||||| ||||| ||| Sbjct 339 AGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTGGCCTT 280 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 |||| || |||||||| || | ||||| || || ||||| |||||||| || | ||| Sbjct 279 CACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTGCCTGTGAGAGT 220 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | || | |||||| Sbjct 219 TTTCACAAAAATTTGCAT 202 >seq215049 Length=488 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||||| || || || || | |||||| || || | || | Sbjct 1 AGTCTAAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGG 60 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || || ||||||||||| |||||||||| |||||| || || ||||| || ||| Sbjct 61 CCATCCTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCC 120 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || ||||||||| ||||||| || || || ||||| | || || || ||||| Sbjct 121 TTATCCTGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTA 180 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| | || || | || | |||||| Sbjct 181 ATAGTTTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 Score = 116 bits (128), Expect = 9e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || |||| || || | |||||||||||| || || |||| ||||| |||||||| || Sbjct 333 CGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTC 392 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || || || |||||||| || |||||||| || | || ||||| || ||||| ||| Sbjct 393 CTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCT 452 Query 225613 TCCTTGTCTTGGATCTT 225629 ||||||||||| ||||| Sbjct 453 TCCTTGTCTTGAATCTT 469 >seq87537 Length=233 Score = 123 bits (136), Expect = 6e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| || || || || | ||| | ||||||||| ||||||||||| || ||||| Sbjct 232 TTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGATC 173 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || | ||| ||||| ||||| || |||||||| || |||||||| || ||| || Sbjct 172 AGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAACATTATCA 113 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || ||| | ||||| |||| ||||| ||||| ||||| | |||||| Sbjct 112 ATGGTATCGGAGCTCTCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTT 60 >seq802 Length=17821 Score = 102 bits (112), Expect = 2e-16 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| Sbjct 11860 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 11801 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 11800 GAGTCTGACAC 11790 >seq16 Length=45662 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 31298 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 31357 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 31358 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 31417 Query 7855 GTTAGCT 7861 ||||||| Sbjct 31418 GTTAGCT 31424 >seq158123 Length=1217 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||||||| || || || || |||| ||||||||| |||| ||| Sbjct 105 ACGGAGACGCAAGACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAATCCGCCAGAGT 46 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAG 225587 |||||||| || |||||||| || |||||||| || Sbjct 45 CCTCCCATCCTCCAGCTGCTTTCCGGCGAAGATCAG 10 >seq18136 Length=774 Score = 93.3 bits (102), Expect = 1e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| |||| || || || || || || ||||| |||| ||||| || || | ||||| Sbjct 649 AAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCG 590 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| || |||||||| || ||||| || |||| || ||||| || || || ||||| Sbjct 589 GCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAGGGATTCCTTC 530 Query 225615 CTTGTCTTGGA 225625 |||||| |||| Sbjct 529 CTTGTCCTGGA 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188955659044328