Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq88759 113 6e-20 seq57780 105 9e-18 seq88758 91.5 2e-13 seq228379 87.8 2e-12 >seq88759 Length=3029 Score = 113 bits (124), Expect = 6e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 |||||| ||||| | ||||| || || | |||| | || | |||||||||| ||| || Sbjct 1241 ACCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCC 1182 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 || ||||||||||| |||||| ||||||||| ||| | || || |||||| || || Sbjct 1181 ATTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGA 1122 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGA 78336 | || |||||||| | || || | | || | ||| || ||||| ||||| || | Sbjct 1121 AACACCAATTCCTCCAG-CAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATA 1063 Query 78337 TACCCTCTATACTGTCATCCATCATG 78362 | || || ||||| ||||| ||||| Sbjct 1062 TTCCTTCAATACTATCATCTTTCATG 1037 >seq57780 Length=6884 Score = 105 bits (116), Expect = 9e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||| | || ||||||||| | |||| | ||| || | ||| || Sbjct 1209 CCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCCA 1150 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 | || || |||||||| ||| ||||||||| ||| | || || ||||| ||||| Sbjct 1149 TGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGAA 1090 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | ||||||||||| || || ||| | ||| || |||| ||||| ||||| Sbjct 1089 AGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGATT 1030 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 || || ||||| ||||| ||||| || |||||||| || Sbjct 1029 CCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq88758 Length=3554 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 |||||||||||| | || || || || |||||| || ||||| |||| |||| ||| Sbjct 1818 TCTCTTTCATATCGGGTGTACAGTTCTTTAAATTCTTCACCCCAGCAATCAGCCAAACCA 1759 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 || ||||| ||||| | || ||||| | ||| | | |||| | ||||||| Sbjct 1758 GGAGCCTCATTAGGGCAAAATAACGACCAATGCTCATTATTTTGCACTCTCTCCATAAAG 1699 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||| |||||||| |||||| ||||| ||| || | | |||||||| Sbjct 1698 AGATCGGGTATCCAGAGAGCATAAAATAAATCACGAGCCCGGTGTTCTTC 1649 >seq228379 Length=361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 194/291 (67%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 48426 AGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTC 48485 || || ||||| |||||||| || || || || || ||||| || || |||||| | | Sbjct 315 AGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCATAAAAAGCACGC 256 Query 48486 GCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCA 48545 || || | | ||| |||||| | || | | || | || ||| || ||||| Sbjct 255 GCCTCCGCCACCTGAACCTCCTTCATGAAGCTGCCGGCTAGGTTTTCAAGAACGATTCCG 196 Query 48546 TCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT 48605 || || || || || || | ||||| ||| |||| || |||| | || || Sbjct 195 TCGGAGGCGGCGAAGAAGGCCAGCACATGAGAAATGAAATGCTTCTCGTCTGGTGTTAGC 136 Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 | ||||| | || ||| | || | ||| || || || |||||||| || || ||| Sbjct 135 GCTTCCCAGTGACGGAGATCCTGGGAGAGATCCACCTCCTCGGCTGTCCAGAAGGAGGCC 76 Query 48666 TCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716 |||||||| || ||||| | ||| || || ||| ||||| ||||| ||| Sbjct 75 TCTGCTTTCTTGTACATTTCCCAAATCTCGGGGTACTGGATCGGGAACATA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692636789559680