Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq88759 127 3e-24 seq57780 123 4e-23 seq88758 109 8e-19 >seq88759 Length=3029 Score = 127 bits (140), Expect = 3e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 |||||| ||||| | ||||| || || | |||| | || | |||||||||| ||| || Sbjct 1241 ACCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCC 1182 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || ||||| ||||| |||||| ||||||||| ||| ||||| |||||| || ||| Sbjct 1181 ATTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGA 1122 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || |||||||| || ||| ||| | |||||| ||||| || ||||| || Sbjct 1121 AACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATAT 1062 Query 76933 GCCCTCTATACTATCATCCATCATG 76957 || || ||||||||||| ||||| Sbjct 1061 TCCTTCAATACTATCATCTTTCATG 1037 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| |||||||| | |||||||| ||||||||||||||| | ||| | ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| |||||| | || ||||| || |||||||| ||||| || | ||||| Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 77113 CATATGCTGAGGTCGTTCTACA 77134 ||| || ||||||| |||||| Sbjct 769 CATGTGTTGAGGTCTCTCTACA 748 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 ||| || | ||| || || |||||||||||||||||||| ||||| ||||| ||| || Sbjct 2593 AATGAAGGTATCAGCAAGACCCTGAACTCCAATACCAATTGGTCTGTGTCTTAAATTTGA 2534 Query 76147 AATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203 |||| ||| ||| || |||||| ||||||| ||| || ||||| || ||||| Sbjct 2533 CATTTTTGCAGTTTC---AACAGGGTAGTAATTAACATCAATGATTTTGTTAAGATTGAA 2477 Query 76204 GACAACTACTT 76214 | |||||||| Sbjct 2476 GGTAACTACTT 2466 >seq57780 Length=6884 Score = 123 bits (136), Expect = 4e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||| | ||| | |||||||||||| | |||| | ||| || | |||||| Sbjct 1209 CCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCCA 1150 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 | || || |||||||| ||| ||||||||| ||| ||||| ||||| || || Sbjct 1149 TGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGAA 1090 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 || ||||||||||| || ||| || | |||||| |||| || |||||||| Sbjct 1089 AGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGATT 1030 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 || || ||||||||||| ||||| || |||||||| || Sbjct 1029 CCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq88758 Length=3554 Score = 109 bits (120), Expect = 8e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 |||||| ||||| | ||| | || |||| ||| | || | |||||||||| |||||| Sbjct 1352 ACCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCC 1293 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || ||||| || || |||||| ||||||||| || ||||| |||||| || || Sbjct 1292 ATTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGA 1233 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || |||||||| || ||| ||| | ||||| ||||| || ||||| || Sbjct 1232 AACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATAT 1173 Query 76933 GCCCTCTATACTATCATCCATCATG 76957 || || ||||||||||| ||||| Sbjct 1172 ACCATCGATACTATCATCTTTCATG 1148 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| |||||||| | || ||||| ||||||||||||||| || || | ||||| Sbjct 1023 AGTTCCGGCATTAAATAGAGTGGGAGAAGCATGAGTGAACCATCGTTGGGACATTAGATG 964 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| ||| ||| || | || || ||||||||| ||||| || | |||||| Sbjct 963 GTATGTTCTGATAGCTGAATCAACGTCATCTTTATGAATTCCAACAGCAACCCTCATCAA 904 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| || ||||| | |||||| || | | |||| | |||||| |||| | Sbjct 903 CATGTGTTGAGGCCTCTCTACAACTTTTCCCTGAACCTTCAGGAGGTATGACCTTTCAAG 844 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || || ||||| || | ||| |||||| || || || || || Sbjct 843 GGTCTTGAAGCCAAAGTAATCATATTCAAAGTCCCTATCATAGATGAT 796 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/158 (72%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 76493 TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCA 76552 |||||||||||| | || || | || |||||| || ||||| |||| |||||||| Sbjct 1818 TCTCTTTCATATCGGGTGTACAGTTCTTTAAATTCTTCACCCCAGCAATCAGCCAAACCA 1759 Query 76553 GGACATTCATTCGGACACATCAATGACCA---CTCACCATCTTCCTTAACCCGTTTCATA 76609 ||| ||||| || || | || ||||| |||| || || | || | | |||| Sbjct 1758 GGAGCCTCATTAGGGCAAAATAACGACCAATGCTCATTATTTTGC---ACTCTCTCCATA 1702 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 |||||||| |||||||| |||||| ||||| ||| || Sbjct 1701 AAGAGATCGGGTATCCAGAGAGCATAAAATAAATCACG 1664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710848959939840