Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq98 643 1e-179 seq28 500 1e-136 seq24621 98.7 1e-15 >seq98 Length=41871 Score = 643 bits (712), Expect = 1e-179 Identities = 742/994 (75%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 183196 TTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTG 183255 ||||| | ||||| |||||||| | ||||| || || | || |||||||| || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 183256 ATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCC 183314 ||||| || ||| | ||| | ||||| |||| || || | || ||| | ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||| || || || || || || || ||||||||| |||| || | | || |||||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 || || |||||||| || ||||| |||| ||| || || | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494 |||||||| ||||| | ||||| ||| | || ||||| |||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554 | |||||| | |||| || || |||||||| |||||||||||| | || ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614 | | |||||||| |||||||| |||||| ||| || |||||||| || || ||||| Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTT-CTTTTAGTGATGGTATGCCCCTGGGTA 183673 ||||||| || | || || | |||||||| ||||| | || |||||||| | || | Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCG-GACGGTATGCCTTTAGGAA 41089 Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733 || ||| || || |||| |||| |||| ||||| || |||||||||||||| ||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793 | || || ||| | || || || ||||| ||||| || || || |||||||| ||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATG 183853 |||| |||| || || || | | ||||| || || ||| || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 183854 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTG 183913 ||||||| || |||||||||| || || || || || || || |||||||| || |||| Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 183914 GTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTG 183973 | || |||||||||| |||||| || ||||| |||||||| | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 183974 CTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTA 184033 |||||||||| || | || |||||||| || ||| | ||| ||||||||||||| || | Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 184034 ACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACA 184093 || | |||||||| || |||||||| ||| | ||||| ||||||||||||| | || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 184094 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATG 184153 | ||||| || || ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 184154 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 |||||||||||||||| ||||| ||||||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 500 bits (554), Expect = 1e-136 Identities = 715/1004 (71%), Gaps = 2/1004 (0%) Strand=Plus/Minus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| ||||| || || || ||||| || || | || | Sbjct 31319 TGGATGACTGGTTGCGGAGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCT 31260 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| || | || | || || ||| | || || ||||| ||||| || || Sbjct 31259 TTCCTTGTGCCTACTTTGCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCT 31200 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCA 186149 |||||||||| || ||||| || || | || || ||| | || | | || || ||| Sbjct 31199 GGTATACCCATGGATTGGCCAGCTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCTGCA 31141 Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209 || || || |||||| | | | | |||||| | | |||| ||||||||||| | Sbjct 31140 GTTTCTACCCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCG 31081 Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269 ||||| ||| | | || |||| ||| | || || || |||| |||||| || |||||| Sbjct 31080 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAC 31021 Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCGTCTCGTAGGT 186329 ||||| || | || |||||||| ||| | || || |||||||| ||| ||| Sbjct 31020 GGAGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAAATTGCTCGATCCGTGCAA 30961 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || ||||| || || ||||||||||| || ||||| |||||| ||||||| Sbjct 30960 TTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 30901 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 || || || || || || || ||| |||||||| || || ||||| || ||||| Sbjct 30900 CTGATTTATCCGCTAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCT 30841 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || ||| ||||| | |||| ||||||| || || || ||||| |||| || || || Sbjct 30840 ATATTTCGATTCATCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCAT 30781 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || ||| | | || | |||||||||| || || ||||||| |||| Sbjct 30780 ATGATGGGAGTTGCTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACT 30721 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 || ||||||||| | | |||||| || || ||||| |||||| || || | | Sbjct 30720 GTCGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 30661 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || |||| |||||||| ||||| |||||||| || ||| | || ||||| || ||||| Sbjct 30660 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTT 30601 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 30600 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 30541 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 ||| | |||| | |||| | | ||||| ||||| ||||| ||||| |||||| Sbjct 30540 GGTTTATGGATGAGCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGAC 30481 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 || || |||||| | | ||||| || |||||||| || ||||| ||||||||||| Sbjct 30480 TTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAA 30421 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 ||||| || || |||||||| | ||||| |||||||| | ||||| || |||||| Sbjct 30420 AATATTCTTTTAAATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 30361 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||| || |||| || || || || | || | || |||||||| Sbjct 30360 AACCTTATATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCT 30317 >seq24621 Length=2300 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 171000 TATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGT 171059 || || || ||||| || || || || ||| |||| || ||||| || | || || Sbjct 2239 TACATCCTGGATGCAGCCGAGGATGCTGGAGTTGAGCTGCCATATTCCTGCAGGGCCGGG 2180 Query 171060 GCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCT 171119 || || || |||||||||||||| |||| | || | || || || |||||| || Sbjct 2179 GCATGCTCTACCTGTGCTGGGAAGATTGCGTCGGGCACAGTCGACCAGTCCGATGGTTCC 2120 Query 171120 TTCCTTGATGATGATCAGATTGAATCAGGTTTCATT-CTGACCTGCGTCTCATATCCTAC 171178 ||||| ||||| |||| | ||||||||| || || ||||||||||| ||||| || || Sbjct 2119 TTCCTCGATGAGAATCA-AGTGAATCAGGGTTACTTGCTGACCTGCGTTTCATACCCAAC 2061 Query 171179 AAGTGATTGTGTAATC 171194 |||||||| ||| Sbjct 2060 TTCAGATTGTGTGATC 2045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620250750769440