Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq98 682 0.0 seq28 554 5e-153 seq153503 82.4 8e-11 >seq98 Length=41871 Score = 682 bits (756), Expect = 0.0 Identities = 751/994 (76%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 |||||||||||| |||| ||||| || ||| | || | || ||||| || || || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || ||||| ||||| | ||| | Sbjct 41506 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCC 41449 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || |||||||| |||| || | | || ||||||| Sbjct 41448 CTCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACA 41389 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || || |||||||| |||| ||| ||||| |||||| ||| ||||||| ||||| | Sbjct 41388 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAA 41329 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| ||| | || |||||| | |||||||| ||||||| |||| ||| Sbjct 41328 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 41269 Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285 | | |||||| | |||| | | ||||||||| ||||||||||||||| || || Sbjct 41268 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCC 41209 Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345 || | |||||||| ||||||||| || ||||| || |||||||| || ||||| | | Sbjct 41208 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCG 41149 Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405 | || ||| || | || || | |||||||| || || || | |||||| | || | Sbjct 41148 CTGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAA 41089 Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465 ||||||| || ||||||| ||| | || ||||||||||||||||||||||| ||||||| Sbjct 41088 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 41029 Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525 | || |||||| | |||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 41028 CATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 40969 Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585 |||| |||| || || || | | || || || |||||||| || || | | Sbjct 40968 GTTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 40909 Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645 ||||||| |||||||| |||| ||||| || || ||||| |||||||| ||||| |||| Sbjct 40908 GTTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 40849 Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705 | || |||| |||||||| ||| ||||||||||| ||||| | ||||||||||| | Sbjct 40848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAG 40789 Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765 | || |||||||| | ||||||||||| || ||| | || ||||||| ||||| |||| Sbjct 40788 CTGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 40729 Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825 || | || |||||||| |||||||| ||| | | ||| |||| |||||||| | || | Sbjct 40728 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 40669 Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885 | ||||| || || ||||||||||| || || |||||||| ||||| || ||||||| Sbjct 40668 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40609 Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||||||||||||| ||||| ||||||| ||| Sbjct 40608 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 554 bits (614), Expect = 5e-153 Identities = 723/995 (73%), Gaps = 10/995 (1%) Strand=Plus/Minus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || |||||||| ||||| || || ||||| || || | || ||||| ||| || || Sbjct 31302 AGGGACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTACTTT 31243 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | ||||||||| | || || || ||||| || || |||||||| || ||| | Sbjct 31242 GCTTTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGGTATACCCATGGATTG 31183 Query 165300 GCGAGTTCCTATCTTGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGA 165358 || || |||||| | || || ||||| ||| | || || ||||||||||| || || | Sbjct 31182 GCCAGCTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCTGCAGTTTCTACCCCTGCTAA 31124 Query 165359 CGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCG 165418 | | | |||||| | || | |||||||||||||| | |||||||| || | || Sbjct 31123 TAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCGCAAGGGGATTTTACTCG 31064 Query 165419 CTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTAT 165478 ||||| ||| | || || || ||||||||||| || ||||||||||| || | ||| || Sbjct 31063 TTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGAGCTTTCGGACTAAT 31004 Query 165479 AGGTTTCATGCTTCGCCAGTTTGAACTGGCACGACTTATCGGT---ATT-CGTCCTTACA 165534 |||||| ||| | || || |||||| | || ||| || || ||| || ||||| | Sbjct 31003 AGGTTTTATGTTACGTCAATTTGAAATTGCTCGA----TCCGTGCAATTGCGACCTTATA 30948 Query 165535 ATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTC 165594 |||| || || || |||||||| |||||||| || ||| ||| || || || ||||| | Sbjct 30947 ATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGC 30888 Query 165595 TGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCC 165654 | || ||||| |||||||| ||||| || || || ||||| || || |||||| Sbjct 30887 TAGGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCA 30828 Query 165655 TGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAG 165714 | || || |||||||||| ||||| ||||| ||||| || ||||| |||||||| || | Sbjct 30827 TCCTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATATGATGGGAGTTG 30768 Query 165715 CAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTT 165774 | ||| | || |||| || |||| | || |||||||||| ||| || || ||||||| Sbjct 30767 CTGGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTGTCGAAAATACTT 30708 Query 165775 TGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGG 165834 | | |||||| ||||| ||||| || ||| || ||| | ||||| | || | Sbjct 30707 TATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAAGCCGAAG 30648 Query 165835 AAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCA 165894 |||||||||| |||||||| || ||||| || ||||| || || ||||| ||||||| Sbjct 30647 AAACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTT 30588 Query 165895 GCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAA 165954 |||||| |||||| | || ||||||||| | ||||| || || | || | |||| | Sbjct 30587 CCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGA 30528 Query 165955 GTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGG 166014 | || |||| | | ||||| || || || || ||||| ||||| || || ||||||| Sbjct 30527 GCGCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGG 30468 Query 166015 AGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTA 166074 | || | || || || ||||| || ||||| || |||||||| ||||| || || | | Sbjct 30467 AAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAA 30408 Query 166075 ATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCC 166134 ||||||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||| Sbjct 30407 ATGAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCC 30348 Query 166135 CTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 | || || || | || | || ||||| |||||| Sbjct 30347 CCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 30313 >seq153503 Length=945 Score = 82.4 bits (90), Expect = 8e-11 Identities = 152/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 161554 GTACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCAGG 161613 ||||||||||||||||||||||||| | ||| | ||| || ||||| || | || || Sbjct 784 GTACATTCTTGACGCAGCTGAGGAAACCGGTATCGACCTCCCATACTCATGCAGGGCTGG 725 Query 161614 CGCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGA--CCAG 161671 |||| || || || || || || | || || || | || || || || ||| Sbjct 724 TTCTTGCTCTTCATGTGCTGGTAAGGTTGTGTCAGGATCTGTGGATCAGTCTGATGGCAG 665 Query 161672 TCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCC 161731 || ||| ||||||||||| || || || | | || ||||||||| ||| ||| Sbjct 664 --CTACCTTGACGATGACCAGATGGACGAGGGGTGGGTGCTCACTTGTGTTGCTTTTCCT 607 Query 161732 ACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 161772 | | ||| ||| |||||||| | ||||| |||| ||| Sbjct 606 CAGGGTGATGTTGTCATTGAGACACACAAAGAGGAGGCACT 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556023177231840