Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq76495 161 2e-34 seq143273 152 1e-31 seq128449 143 6e-29 seq215049 132 1e-25 seq30058 122 2e-22 seq105808 105 1e-17 seq30782 95.1 3e-14 seq40433 87.8 4e-12 seq18136 84.2 5e-11 seq1027 84.2 5e-11 >seq76495 Length=1287 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| || ||||| || ||||| | ||| || ||||||||||||||||| | Sbjct 654 AACCACCACGGAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCG 595 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | | || || |||||||| || || || || ||||||||||| | || ||||| | Sbjct 594 CCAAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGG 535 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 |||| || |||||||||||||| || ||||| || |||| ||||| || || ||| || Sbjct 534 GAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTATCAATAGTATCAGA-GCTCTCC 476 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || | || || || || || |||| |||||||| |||||||||||| Sbjct 475 ACCTCCAAGGTAATGGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 Score = 118 bits (130), Expect = 2e-21 Identities = 166/228 (73%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACG-TGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 || |||||||| || | |||| || | | || ||||||| | ||||||||||| | Sbjct 424 CCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTT-GAATGTTGTAGTCGAC 366 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||| || ||||| ||||| ||||| ||||| | || ||||| || Sbjct 365 AAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGG 306 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || |||||||| || |||||||| || || | || || |||| || |||| || | Sbjct 305 GATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGT-CGGAGCTCTCAA 247 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 | || | |||||| || || ||||| | |||||| || || || |||| Sbjct 246 CCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq143273 Length=304 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || ||||| || ||||| | ||| || ||||||||||| ||||| || || || || Sbjct 303 AGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGT 244 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||||||||| || || || || ||||||| | ||| ||||| |||||||| ||| Sbjct 243 CCATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCC 184 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 ||||||||||| || || || || |||| ||||| ||||| ||| || || | || Sbjct 183 TTGTCTTGGATTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAACGTA 124 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| |||| |||||| || || ||||||||| Sbjct 123 ATGGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCATT 85 >seq128449 Length=764 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| || || ||| ||||||||||| ||||||||| Sbjct 428 CCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCA 369 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||||||||| || || || ||||| || | | || ||||| || Sbjct 368 AGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGG 309 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| ||||| ||||| || || || |||| || ||||| ||| || || Sbjct 308 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACC 249 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||| || || || || ||||| Sbjct 248 TCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||||||||| |||| || | || || ||||| ||||||||||| || Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | ||||| || || || || |||||||| |||| | ||| |||||| || Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || ||||| || || || | ||||| ||||| || ||| ||| Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACT 477 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || |||| ||||| || || |||||||| Sbjct 476 TCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 Score = 107 bits (118), Expect = 4e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | || |||| || | ||| ||| |||||||| ||||| |||||| Sbjct 200 CCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCA 141 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||||||||| || || ||||| || | | || ||||| || Sbjct 140 AGGGTACGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGG 81 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || ||||| || || || || || || || |||| || ||||| | |||| || || Sbjct 80 ATTCCTTCCTTATCCTGAATTTTGGCCTTCACATTATCAATGGTGTCTG-AGCTCTCAAC 22 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 || | |||||| || || || Sbjct 21 CTCCAAAGTGATGGTTTTTCC 1 >seq215049 Length=488 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 |||||||| ||| | || || || || || |||||||| ||||| ||||||||||| Sbjct 6 AAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATC 65 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 ||| ||||| ||||| |||||||| | | |||||| || ||||| |||||||| || Sbjct 66 CTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATC 125 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 ||||||||||| || || |||| || || || ||| || || || | || || || Sbjct 126 CTGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGT 185 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| | ||||| || || || ||||| Sbjct 186 TTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 Score = 96.9 bits (106), Expect = 7e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| |||| || | ||| || || |||||||||||||| || Sbjct 327 CCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 386 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | ||| ||||| || || || ||||| ||||||| | || ||||| ||| Sbjct 387 AAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 446 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033 || || ||||||||||| ||||| || || ||| | ||||| Sbjct 447 ATTCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGAT 487 >seq30058 Length=4835 Score = 122 bits (134), Expect = 2e-22 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 282938 GCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACC 282997 ||| ||||| || ||||| || ||||||||||| | | |||||| || |||||||| Sbjct 1 GCGTCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACC 60 Query 282998 CTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAG 283057 ||||||||| |||||||| || ||||| | || || ||||| ||| ||| ||||| || Sbjct 61 CTCCTTGTCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAG 120 Query 283058 AGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || | ||| || || ||||| ||||| Sbjct 121 GGTTATAGTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 >seq105808 Length=219 Score = 105 bits (116), Expect = 1e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | ||| || || || ||||| ||||||||| Sbjct 106 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCA 165 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || ||||||||||||||||| || || |||||||||||||| | ||| ||||| Sbjct 166 AGGGTGCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTC 218 >seq30782 Length=5251 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| || || || | || ||||| || | |||||| Sbjct 3001 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATAGTATCACTCGATTCGACC 3060 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| || || ||||| ||||||||||| || ||||| |||||||| || Sbjct 3061 TCGAGTGTAATAGTCTTCCCCGTCAAAGTTTTCACGAAGATCTGCATCTT 3110 >seq40433 Length=1890 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| ||||| |||||||| || || || | || ||||| || | |||||| Sbjct 759 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATAGTATCACTTGATTCGACC 700 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || || || ||||| |||||||| ||||| || || |||||||||||| Sbjct 699 TCAAGTGTTATGGTCTTGCCCGTCAAGGTCTTCACAAAGATCTGCATTTTC 649 >seq18136 Length=774 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||||||| | || ||||| ||||||||||||||||| || || ||||||||||| Sbjct 639 ACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCGGCCATCCTCC 580 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 || || || ||||| || |||| | || ||||| || || || |||||||| ||| Sbjct 579 AGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGG 520 Query 283011 A 283011 | Sbjct 519 A 519 >seq1027 Length=13177 Score = 84.2 bits (92), Expect = 5e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||||||| | || || || |||||||| ||||||||||| || ||||||||||| Sbjct 4831 ACCAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTTCGGCCATCCTCC 4890 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || || || ||||| | |||||||| ||| ||||| ||||| || || Sbjct 4891 AATTGCTTGCCAGCGAAAATCAATCTCTGTTGGTCCGGCGGGATACCTTCCTTATCCTG 4949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1043600784099848