Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq128449 159 8e-34 seq87537 158 3e-33 seq143273 150 4e-31 seq18136 129 1e-24 seq30058 120 7e-22 seq215049 114 3e-20 seq76495 114 3e-20 seq142934 89.7 1e-12 seq40433 86.0 2e-11 >seq128449 Length=764 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || || || ||||| || ||||| | || || |||||||| ||| Sbjct 433 CAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTCTGAC 492 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| ||||||||||| || ||||||||| Sbjct 493 ACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCAGCAA 552 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || ||||| || ||||| |||||||||||||| | ||||| || ||| | Sbjct 553 AGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAACATT 612 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || ||||| || |||| Sbjct 613 CAAAAGGAGTCTACACTCCA-CTTG 636 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||||||||||||||| || || |||||| | |||||||| || || ||| Sbjct 205 CAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCTGAC 264 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||| || || || || ||||| || |||||||| Sbjct 265 ACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAGCAG 324 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || || || ||||| || ||||| | || ||||| || |||||| || Sbjct 325 AGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAACATC 384 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| ||||| || ||||| Sbjct 385 CAAAAGGAATCTACTTTGCAT 405 Score = 129 bits (142), Expect = 1e-24 Identities = 138/181 (76%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 |||||||| ||||| | ||||| || |||||||||||||| || || || || || Sbjct 1 GGAAAAACCATCACTTTGGAGGTTGAGAGCTCAGACACCATTGATAATGTGAAGGCCAAA 60 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 |||||||| || ||||||||||| ||||||||||| | || || || || || || || Sbjct 61 ATTCAGGATAAGGAAGGAATCCCACCGGACCAGCAGAGGCTCATTTTTGCTGGCAAGCAA 120 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127 || || ||||| | || ||||| ||||| || ||||||| ||||| || || || ||| Sbjct 121 CTAGAGGATGGCCGTACCCTTGCTGATTACAATATCCAAAAGGAATCCACTCTCCA-CTT 179 Query 178128 G 178128 | Sbjct 180 G 180 >seq87537 Length=233 Score = 158 bits (174), Expect = 3e-33 Identities = 146/185 (79%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||||| || ||||| || ||||| || |||||||| ||||| || Sbjct 48 CAGATCTTTGTGAAAACTCTAACGGGAAAGACCATCACTCTAGAGGTGGAGAGCTCCGAT 107 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||| ||||| || ||||| ||||| |||||||||||| Sbjct 108 ACCATTGATAATGTTAAAGCCAAGATCCAGGATAAGGAAGGGATCCCGCCGGACCAGCAA 167 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||||| |||||||| | |||||||| || |||||| || Sbjct 168 AGGCTGATCTTTGCAGGGAAGCAGCTGGAAGATGGGCGTACTCTTGCGGACTATAACATC 227 Query 178104 CAAAA 178108 || || Sbjct 228 CAGAA 232 >seq143273 Length=304 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || ||||| || || | ||||| |||||||| || Sbjct 89 CAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAAAGCTCGGAT 148 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || ||||| ||||| || || |||||||||||| Sbjct 149 ACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGACCAGCAA 208 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || || ||||| || |||||| | || || || || |||||| || Sbjct 209 AGACTGATCTTCGCTGGTAAGCAGCTAGAGGATGGACGTACCCTGGCAGACTATAACATC 268 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || ||||||||||| Sbjct 269 CAAAAGGAGTCCACTCTGCATCTTGT 294 >seq18136 Length=774 Score = 129 bits (142), Expect = 1e-24 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||| |||||||||||||| |||||||| |||| || |||||||| || ||||| Sbjct 521 CAGGACAAGGAAGGAATCCCTCCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTG 580 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| | ||||| || || || ||| |||| ||||| |||||||| ||||| ||| Sbjct 581 GAGGATGGCCGAACTCTCGCTGACTACAACATCCAGAAAGAGTCAACACTTCATCTGGTT 640 Query 178131 TTGAGACTCAG 178141 ||||| || || Sbjct 641 TTGAGGCTTAG 651 >seq30058 Length=4835 Score = 120 bits (132), Expect = 7e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||||| || ||||| || || ||||| || |||||||| || ||| Sbjct 159 CAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAAAGTTCCGAC 100 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| || || || || || || || ||| Sbjct 99 ACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAACAA 40 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079 | || ||||| ||||| || || || ||||||||| Sbjct 39 AGGCTCATCTTTGCCGGCAAGCAACTTGAAGATGGA 4 >seq215049 Length=488 Score = 114 bits (126), Expect = 3e-20 Identities = 112/143 (78%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| |||||||| ||||| |||||||| || ||||||||||| | Sbjct 488 CATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGAATTCCCCCGGACCAGCAGAG 429 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| ||||| || || || ||||| | ||||| || ||| |||| Sbjct 428 GCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGGACCTTGGCCGACTACAACATCCA 369 Query 178106 AAAAGAATCAACACTGCATCTTG 178128 || || || || || || |||| Sbjct 368 GAAGGAGTCCACTCTCCA-CTTG 347 >seq76495 Length=1287 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || ||||| || ||| | |||||||| ||||| || Sbjct 429 CAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTCTGAT 488 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || ||||| ||||| || || || |||||||| Sbjct 489 ACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 548 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| || ||||| | || | || || || ||| || Sbjct 549 AGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAACATC 608 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || ||||||||||| Sbjct 609 CAAAAGGAGTCCACTCTGCATCTTGT 634 >seq142934 Length=1602 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| || |||||||| ||||| || | |||||||||||||| |||||||||||||| || Sbjct 1468 AGGTATTCCTCCGGATCAGCAGCGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGCAG 1409 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 || ||||| ||||| ||| | || |||| Sbjct 1408 AACCCTTGCTGATTACAACATACAGAAAG 1380 >seq40433 Length=1890 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||||||||||||||| ||||| | |||||||| ||||| || ||||| |||||||| || Sbjct 867 AGGAATCCCTCCGGATCAGCAGAGGCTTATCTTTGCCGGGAAGCAGCTGGAAGATGGCAG 926 Query 178082 GACTCTTGCCGATTATAACGTCCAAAA 178108 |||||| || || || ||| | || || Sbjct 927 GACTCTGGCTGACTACAACATTCAGAA 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200122078322328