Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq143273 120 3e-22 seq76495 113 4e-20 seq128449 96.9 3e-15 seq215049 93.3 4e-14 seq105808 91.5 1e-13 seq18136 82.4 7e-11 >seq143273 Length=304 Score = 120 bits (132), Expect = 3e-22 Identities = 162/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || |||||||| ||| |||||| || ||||||||||| | ||||| || Sbjct 303 AGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGT 244 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || ||||| ||||| | || ||||||| ||||| | ||| Sbjct 243 CCATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCC 184 Query 41765 TTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTCCACCTCCAC 41820 ||||| |||||| ||||| | | | | ||| || ||| || ||||||| Sbjct 183 TTGTCTTGGATTTTGGCCTTCACATTATCA-ATAGTATCCGAGCT---TTCAACCTCCAA 128 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || |||||||| ||||| ||||| || || |||||||| Sbjct 127 CGTAATGGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCAT 86 >seq76495 Length=1287 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| ||| |||||| || ||||| ||||| | Sbjct 652 CCACCACGGAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCC 593 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| ||| | || || |||||||| || || || |||| | ||| ||||| | |||| Sbjct 592 AAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 533 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | || |||||||| |||||| |||| | | | | ||| || |||| || Sbjct 532 ATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTATCA-ATAGTATCAGAGCTC---TC 477 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| || ||||||||||| || || |||||||| Sbjct 476 CACCTCCAAGGTAATGGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCAT 426 >seq128449 Length=764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||||| || ||||| || ||||||||||| | Sbjct 429 GCCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGC 370 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || ||||||||||| || || || || | ||| ||||| | || Sbjct 369 AAGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGG 310 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGC-TTCA-ACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||| || ||| | || || |||| | | | | ||||| |||| Sbjct 309 GATGCCCTCCTTATCT-TGAATCTTGGCCTTCACATTATCA-ATGGTGTCAGAACTCTCC 252 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || || || || || || || || || ||||| |||||| Sbjct 251 ACCTCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCATG 201 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||||| || || || |||||| |||||||| ||||||| Sbjct 657 GCCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGC 598 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || | | || || |||||||||||||| |||||||| | || ||||| | || Sbjct 597 CAATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGG 538 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | ||||||||| || | || || | ||| | | | ||||| ||| | Sbjct 537 GATTCCTTCCTTGTCC-TGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCT---TT 482 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || |||| || || || || || ||||| ||||| || |||||||||||| Sbjct 481 CTACTTCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCATG 429 >seq215049 Length=488 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || || |||||||||||| || ||||| | || ||||| | || || Sbjct 10 ACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCA 69 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| || || || || || | ||||| || | |||| || |||||| ||| | Sbjct 70 AGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGG 129 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA--CTCCACCTCCACCGTTATCGTTT 41831 || ||| ||||| | | | ||| || | ||| ||||||| ||| || |||| Sbjct 130 ATCTTTGCCTTCA--CATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTT 187 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| || ||||| || ||||| |||||| Sbjct 188 TTCCCGTGAGGGTCTTCACAAAAATTTGCATG 219 >seq105808 Length=219 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || ||| ||||||||||||||||||||| | Sbjct 105 GCCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGC 164 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC 41749 |||||||| | || || |||||||| ||||| || |||| | || |||||| Sbjct 165 AAGGGTGCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCC 219 >seq18136 Length=774 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||||||| || || ||| ||||| ||||| ||||| | ||| || || | || Sbjct 642 AAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCGGCCATCC 583 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||||||||||||||| ||||| | ||| ||||| | || | | ||||||||| Sbjct 582 TCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCC 523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460951691454400