Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq229 123 2e-23 seq3103 116 2e-21 seq69 96.9 2e-15 >seq229 Length=1646 Score = 123 bits (136), Expect = 2e-23 Identities = 82/91 (90%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1556 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1615 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATG 25987 |||||| |||||||||||||||||||||||| Sbjct 1616 TAATCCATTCATGCGCGTCACTAATTAGATG 1646 >seq3103 Length=508 Score = 116 bits (128), Expect = 2e-21 Identities = 84/96 (88%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTT-GGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCG 25955 |||||||||||||| || |||||||||||| ||||||||| |||| || |||||| Sbjct 195 AAGCCCGTTCCCTTCGGTTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCA 136 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| |||||||||||||||||||||||||||| Sbjct 135 TTAATCCATTCATGCGCGTCACTAATTAGATGACGA 100 >seq69 Length=3445 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1901 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1960 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1961 GCCCGTATTTAGCCTT 1976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334919600455391