Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq131 482 7e-132 seq5 441 2e-119 >seq131 Length=2205 Score = 482 bits (534), Expect = 7e-132 Identities = 699/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || ||||| || |||||||| || | |||||||| || || | Sbjct 1330 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1271 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| |||||||||| || || || Sbjct 1270 ATGATCCCTACCTTATTGACCGCAACTTC-TGTGTTTATTATTGCCTTCATTGCCGCTCC 1212 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | ||||||||||| Sbjct 1211 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 1152 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || ||||| || | | || | ||| || ||||| | || ||||| || || Sbjct 1151 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAAT 1092 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||| | | | || || ||| |||||||||| || || ||| |||| ||| | Sbjct 1091 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1032 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | ||||||||| | || ||||| || || | ||||||| || || | | Sbjct 1031 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 972 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| |||| ||||| |||||||||| |||| || | | || ||| ||| Sbjct 971 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 912 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||||| | || || | || ||||| |||||| |||||| |||||||| || || Sbjct 911 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 852 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||||||||| ||||| ||| | |||||||| || || || || || || ||||| || Sbjct 851 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCC 792 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 ||| || ||| || || ||||| || ||||| || | || ||| ||||||||| || Sbjct 791 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 732 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGG 26460 ||||| ||||| | || ||||| ||||| | | || ||| | || Sbjct 731 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 672 Query 26461 CTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 26520 || | || || ||||| ||||| || |||||||| || || || || || || ||||| Sbjct 671 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 612 Query 26521 GAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGC 26580 |||| || || || ||||| ||||| || ||| ||||| | || ||||| || || Sbjct 611 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGC 552 Query 26581 TACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAA 26640 | ||||||| || || || || ||| | || || | |||||| | || |||||||| || Sbjct 551 TGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGTACTATGGCATTCAA 492 Query 26641 CCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTAC 26700 |||||||||||| || |||||||| || ||||| ||| | || |||| ||| Sbjct 491 CCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATAC 432 Query 26701 ATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGC 26760 ||||||||| | | ||||| |||||||| || | ||||||||||| || |||||||| Sbjct 431 TTGGGCTGATATTATCAACCGTGCTAACCTGGGTATGGAAGTTATGCATGAACGTAATGC 372 Query 26761 TCATAACTTTCCACTTGACTTAGC 26784 ||||||||| || || || |||| Sbjct 371 TCATAACTTCCCTCTAGATCTAGC 348 >seq5 Length=20976 Score = 441 bits (488), Expect = 2e-119 Identities = 657/932 (70%), Gaps = 0/932 (0%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || |||||||| || | ||||||||||| || | Sbjct 474 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 533 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACCG 25921 ||||| || |||| | | || ||| | ||||| |||||||||| || || || Sbjct 534 ATGATCCCTACCTTATTGACCGCAACTTCGGTATTTATTATTGCCTTCATTGCTGCTCCT 593 Query 25922 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 25981 || |||||||| ||||| || ||||| || ||||| || || || | |||||||||||| Sbjct 594 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAAT 653 Query 25982 ATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATC 26041 || | ||||| || | | || | ||| || ||||| | || |||||||| ||| Sbjct 654 ATTCTCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATC 713 Query 26042 TGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATC 26101 |||||||| | | | || || ||| ||||||| || || || ||| |||| ||| | Sbjct 714 TGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTT 773 Query 26102 TTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGA 26161 | ||||||||| | || ||||| | || || | |||||||||| || | | Sbjct 774 CTACACTTCTTACTTGGTGTAGCTTCTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 833 Query 26162 CTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCA 26221 || || ||| |||| ||||| |||||||||| | || || | | || ||| ||| Sbjct 834 CTGGGTATGCGACCTTGGATTGCTGTTGCATATTCCGCTCCTGTTGCAGCTGCTACCGCT 893 Query 26222 GTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATC 26281 || ||||| | || || |||| ||||| |||||| |||||| |||||||| || || Sbjct 894 GTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATT 953 Query 26282 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCA 26341 | ||||||||| ||||| ||| | |||||||| || || || || || || ||||||||| Sbjct 954 TATGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 1013 Query 26342 TTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGA 26401 || || ||| || || ||||| || ||||| || | || ||| ||||||||| || Sbjct 1014 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 1073 Query 26402 AGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGC 26461 ||||| ||||| | || ||||| ||||| | | || ||| | || Sbjct 1074 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 1133 Query 26462 TATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGG 26521 || | || || ||||| ||||| || |||||||| || || || || || || ||||| Sbjct 1134 TAGAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 1193 Query 26522 AGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCT 26581 |||| || || || ||||| ||||| || ||| ||||| | || ||||| || ||| Sbjct 1194 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCT 1253 Query 26582 ACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAAC 26641 ||||||| || || || || ||| | || || | |||||| |||| |||||||| ||| Sbjct 1254 GCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAAC 1313 Query 26642 CTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACA 26701 |||||||| || || || ||||| || ||||| ||| | | || |||| ||| Sbjct 1314 CTAAATGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACT 1373 Query 26702 TGGGCTGATGTATTAAACCGAGCTAACCTCGG 26733 ||||||||| | | ||||| |||||||| || Sbjct 1374 TGGGCTGATATCATCAACCGTGCTAACCTTGG 1405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146714619795864