Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq131 536 4e-148 seq5 482 7e-132 >seq131 Length=2205 Score = 536 bits (594), Expect = 4e-148 Identities = 714/992 (72%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| |||| ||||| || || |||||||| || || ||||| ||||||||||||||||| Sbjct 339 TCAACAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 398 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || |||||||| | ||| ||||||||||| | || | || | | |||| Sbjct 399 CCCAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCA 458 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || || || || || || || || || || || || || |||||||| || || | | Sbjct 459 ACTACAGATTGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAA 518 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 || || | ||| || | || ||||||||||| |||||||| ||||| || Sbjct 519 GCAGTGAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAG 578 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 579 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 638 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 ||||| || ||||| ||||| |||||| | || || | || ||||||| | || Sbjct 639 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 698 Query 36324 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 36383 ||||| | || | ||||| || | || ||||||||| ||||| | || Sbjct 699 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 758 Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 36443 |||||||| || || || || | ||| || || |||||||||||||| ||||| || ||| Sbjct 759 CCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCC 818 Query 36444 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 36503 || || |||| ||| || |||||||| || ||||| || ||||||||||||||||| ||| Sbjct 819 TGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 878 Query 36504 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 36563 || ||||| |||| ||||||| ||||| ||||| || ||||||||||| |||||| Sbjct 879 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAA 938 Query 36564 TAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 36623 || || ||| ||||| || | |||||| || | ||||||| ||||| | || ||| Sbjct 939 TATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCC 998 Query 36624 AAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 36683 | |||| | | ||||| | ||||| | ||||| |||| ||| || || || || Sbjct 999 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTG 1058 Query 36684 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 36743 |||||||| || || | || ||| |||||||| ||||| || ||||| | |||||| || Sbjct 1059 TATAACCATTCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCT 1118 Query 36744 TTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 36803 || | || | || || || ||||| || |||||||| || |||| | ||| || Sbjct 1119 GCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 1178 Query 36804 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 36863 ||||| |||||||||||||| ||||| || ||||| || |||| || ||||| | ||| Sbjct 1179 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAAC 1238 Query 36864 GCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGG 36923 | | ||| || || | | ||||||||| | || |||||||| || | || || Sbjct 1239 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGA 1298 Query 36924 CGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 ||||| | ||||| || | ||||| ||| || Sbjct 1299 CGGTTTTCGGTACTAGTTATCCAGTTACAGAA 1330 >seq5 Length=20976 Score = 482 bits (534), Expect = 7e-132 Identities = 669/937 (71%), Gaps = 0/937 (0%) Strand=Plus/Minus Query 36019 CCATGCCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGG 36078 |||| || | || |||||||| | || ||||||||||| | || | || | Sbjct 1410 CCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGAC 1351 Query 36079 AATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTC 36138 |||||| || || || ||||| || ||||| || || || || ||||||||| || | Sbjct 1350 TATCAACTACAGATTGGTTGAAATTGAAGCCATTTAGGTTGAATGCCATAGTGCTGATAC 1291 Query 36139 CCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGC 36198 | | ||| || | ||| || | || ||||||||||| |||||||| ||||| | Sbjct 1290 CTAAAGCAGTGAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAAC 1231 Query 36199 GGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAA 36258 | || || || |||||||| |||||||| | || ||||| || |||||||| || | Sbjct 1230 GAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTA 1171 Query 36259 CAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCC 36318 | || ||||| || ||||| ||||| |||||| | || || | || ||||||| Sbjct 1170 CGATATTATAAGTTTCTTCCTCTTGACCGAATCTCTAACCTTCATTAGCAGATTCATTTT 1111 Query 36319 CAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAG 36378 | || ||||| | || | ||||| || | || ||||||||| ||||| | Sbjct 1110 CTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGG 1051 Query 36379 CTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTT 36438 || |||||||| || || || || | ||| || || || ||||||||||| ||||| | Sbjct 1050 AGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCT 991 Query 36439 CTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAG 36498 | ||||| || |||| ||| || |||||||| || |||| || |||||||||||||||| Sbjct 990 CAGCCTGGAATACAATCATGAAGTTGAAAGTACCATAAATTCCTAGAGGCATACCATCAG 931 Query 36499 AGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGG 36558 | ||||| ||||| || | ||||||| ||||| ||||| || ||||||||||| | Sbjct 930 AAAAACTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAG 871 Query 36559 CTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTC 36618 | ||||| || ||| ||||| || | |||||| || | ||||||||||||| | | Sbjct 870 CGGAATATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCAC 811 Query 36619 GTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTC 36678 | |||| ||||| | | ||||| | ||||| | ||||| |||| ||| || || | Sbjct 810 GACCCATGTAAGAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCAC 751 Query 36679 CGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGA 36738 |||| |||||||| || || | || ||| ||||||||||||||||| ||||| | ||||| Sbjct 750 CGTTGTATAACCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGA 691 Query 36739 TTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTC 36798 | || || | || | || || || |||| || |||||||| || |||| | || Sbjct 690 TAGCTGCAGAAGTAGGAATAATGGCACCTGAGAGAATATTGTTTCCGTAAAGTAGAGATC 631 Query 36799 CTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTA 36858 | || ||||| |||||||||||||| ||||| || ||||| ||||||| || ||||| | Sbjct 630 CAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAA 571 Query 36859 AAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACAT 36918 |||| | | ||| || || | | ||||||||| | || || ||||| || | | Sbjct 570 TAAATACCGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGT 511 Query 36919 AGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 | || ||||| | || || || | ||||| ||| || Sbjct 510 AAAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150442320486394