Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq131 531 2e-146 seq5 482 7e-132 >seq131 Length=2205 Score = 531 bits (588), Expect = 2e-146 Identities = 713/992 (72%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| ||| |||| || ||||||||||| || || ||||| ||||||||||||||||| Sbjct 339 TCAACAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 398 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || |||||||| | ||| ||||||||||| | || | || | | |||| Sbjct 399 CCCAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCA 458 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || || || || || || || || || || || || || |||||||| || || | | Sbjct 459 ACTACAGATTGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAA 518 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 || || | ||| || | || ||||||||||| |||||||| ||||| ||| Sbjct 519 GCAGTGAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAG 578 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 579 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 638 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 ||||| || ||||| ||||| |||||| | || || | || ||||||| | || Sbjct 639 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 698 Query 25804 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 25863 ||||| | || | ||||| || | || ||||||||| ||||| | || Sbjct 699 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 758 Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 25923 |||||||| || || || || | ||| || || |||||||||||||| ||||| || ||| Sbjct 759 CCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCC 818 Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983 || || |||| ||| || |||||||| || ||||| || ||||||||||||||||| ||| Sbjct 819 TGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 878 Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043 || ||||| |||| ||||||| ||||| ||||| || ||||||||||| |||||| Sbjct 879 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAA 938 Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103 || || ||| ||||| || | ||| || || | ||||||| ||||| | || ||| Sbjct 939 TATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCC 998 Query 26104 AAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTA 26163 | |||| | | || | | ||||| | ||||| |||| ||| || ||||| || Sbjct 999 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTG 1058 Query 26164 TACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 26223 || ||||| || || | || ||| |||||||| ||||| || ||||| | |||||| || Sbjct 1059 TATAACCATTCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCT 1118 Query 26224 TTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 26283 ||| | || | || || |||||||| || |||||||| || |||| | ||| || Sbjct 1119 GCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 1178 Query 26284 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 26343 ||||| |||||||||||||| ||||| || ||||| || |||| || ||||| | ||| Sbjct 1179 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAAC 1238 Query 26344 GCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGG 26403 | | ||| || || | | ||||||||| | || |||||||| || | || || Sbjct 1239 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGA 1298 Query 26404 CGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 ||||| | ||||| || | ||||| ||| || Sbjct 1299 CGGTTTTCGGTACTAGTTATCCAGTTACAGAA 1330 >seq5 Length=20976 Score = 482 bits (534), Expect = 7e-132 Identities = 669/937 (71%), Gaps = 0/937 (0%) Strand=Plus/Minus Query 25499 CCATGCCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGG 25558 |||| || | || |||||||| | || ||||||||||| | || | || | Sbjct 1410 CCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGAC 1351 Query 25559 AATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTC 25618 |||||| || || || ||||| || ||||| || || || || ||||||||| || | Sbjct 1350 TATCAACTACAGATTGGTTGAAATTGAAGCCATTTAGGTTGAATGCCATAGTGCTGATAC 1291 Query 25619 CCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTAC 25678 | | ||| || | ||| || | || ||||||||||| |||||||| ||||| || Sbjct 1290 CTAAAGCAGTGAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAAC 1231 Query 25679 GGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAA 25738 | || || || |||||||| |||||||| | || ||||| || |||||||| || | Sbjct 1230 GAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTA 1171 Query 25739 CAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCC 25798 | || ||||| || ||||| ||||| |||||| | || || | || ||||||| Sbjct 1170 CGATATTATAAGTTTCTTCCTCTTGACCGAATCTCTAACCTTCATTAGCAGATTCATTTT 1111 Query 25799 CAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAG 25858 | || ||||| | || | ||||| || | || ||||||||| ||||| | Sbjct 1110 CTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGG 1051 Query 25859 CTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTT 25918 || |||||||| || || || || | ||| || || || ||||||||||| ||||| | Sbjct 1050 AGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCT 991 Query 25919 CTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAG 25978 | ||||| || |||| ||| || |||||||| || |||| || |||||||||||||||| Sbjct 990 CAGCCTGGAATACAATCATGAAGTTGAAAGTACCATAAATTCCTAGAGGCATACCATCAG 931 Query 25979 AGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGG 26038 | ||||| ||||| || | ||||||| ||||| ||||| || ||||||||||| | Sbjct 930 AAAAACTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAG 871 Query 26039 CTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTC 26098 | ||||| || ||| ||||| || | ||| || || | ||||||||||||| | | Sbjct 870 CGGAATATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCAC 811 Query 26099 GTCCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCAC 26158 | |||| ||||| | | || | | ||||| | ||||| |||| ||| || |||| Sbjct 810 GACCCATGTAAGAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCAC 751 Query 26159 CGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGA 26218 |||| || ||||| || || | || ||| ||||||||||||||||| ||||| | ||||| Sbjct 750 CGTTGTATAACCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGA 691 Query 26219 TTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTC 26278 | || ||| | || | || || ||||||| || |||||||| || |||| | || Sbjct 690 TAGCTGCAGAAGTAGGAATAATGGCACCTGAGAGAATATTGTTTCCGTAAAGTAGAGATC 631 Query 26279 CTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTA 26338 | || ||||| |||||||||||||| ||||| || ||||| ||||||| || ||||| | Sbjct 630 CAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAA 571 Query 26339 AAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACAT 26398 |||| | | ||| || || | | ||||||||| | || || ||||| || | | Sbjct 570 TAAATACCGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGT 511 Query 26399 AGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 | || ||||| | || || || | ||||| ||| || Sbjct 510 AAAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151981396908836