Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq131 587 9e-163 seq5 522 3e-143 >seq131 Length=2205 Score = 587 bits (650), Expect = 9e-163 Identities = 727/992 (73%), Gaps = 2/992 (0%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 |||| | ||| ||||| | | || ||||| | || |||| ||||| |||||| | | Sbjct 1329 TCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGA 1270 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| | ||||||||||| || |||| Sbjct 1269 TGATCCCTACCTTATTGACCGCAACTTCTGTGTTTATTATTGCCTTCATTGCCGCTCCTC 1210 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||||||||| || |||| ||| || | || || ||||| | Sbjct 1209 CAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATA 1150 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | ||||| ||||| || | |||| ||| || || ||| | ||||| ||||| |||| Sbjct 1149 TTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAATTT 1090 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||||||| | ||||||| ||||| |||||||||||||||| |||| | || Sbjct 1089 GGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTC 1030 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTC 155329 | |||||| | | || | | ||| |||||| ||||||| ||| || ||||| Sbjct 1029 TACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTC 970 Query 155330 TTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTG 155389 | || ||||| |||||||| ||||||||| || || || || | ||||| ||||| Sbjct 969 TGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTG 910 Query 155390 TATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCT 155449 | ||| | | || || | |||||||| ||| ||||||| |||||||| || || | Sbjct 909 TTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTT 850 Query 155450 CTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCT 155509 |||||||||| |||| ||| | || ||||| || || ||||| ||||||||||| || | Sbjct 849 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCCAT 790 Query 155510 TCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTT 155569 | |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| |||| Sbjct 789 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTT 730 Query 155570 CATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTT 155629 | ||||| || ||| | ||| | ||||| || || | || ||| || | |||| Sbjct 729 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 670 Query 155630 ACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTC 155689 ||| ||||| ||||| |||||||||||||| || || || |||||||| || || || | Sbjct 669 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCC 610 Query 155690 GTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTG 155749 | | |||||||| ||||| ||||||||||| | | ||||||||||| |||| Sbjct 609 GATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGCTG 550 Query 155750 CATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACC 155809 | |||||||| || | |||||| |||||| | ||| | || ||||||||||||| Sbjct 549 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGTACTATGGCATTCAACC 490 Query 155810 TTAACGGTTTCAACTTCAACCAGTCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCTACA 155868 | || |||||||| || ||||| |||||||| || || | || || || ||| Sbjct 489 TAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCA-AGGCCGTGTAATTAATACT 431 Query 155869 TGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCT 155928 ||||| || ||| | ||||| ||| || ||||||||||| ||||| || ||||| ||| Sbjct 430 TGGGCTGATATTATCAACCGTGCTAACCTGGGTATGGAAGTTATGCATGAACGTAATGCT 371 Query 155929 CACAACTTCCCTCTTGACCTTGCTGCTGCTGA 155960 || ||||||||||| || || ||||||| ||| Sbjct 370 CATAACTTCCCTCTAGATCTAGCTGCTGTTGA 339 >seq5 Length=20976 Score = 522 bits (578), Expect = 3e-143 Identities = 666/916 (73%), Gaps = 6/916 (1%) Strand=Plus/Plus Query 154993 GACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCT 155052 || ||||| | || | || |||||||||||| | ||||||||| | | | | || Sbjct 498 GAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCA 557 Query 155053 GCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGT 155112 || | || ||| | |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct 558 ACTTCGGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 617 Query 155113 GAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCT 155172 ||||| || |||| ||| || | || || ||||| || |||| ||||| || | ||| Sbjct 618 GAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTCTCTCAGGTGCCATTATTCCT 677 Query 155173 AGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAG 155232 | ||| || || ||| | ||||| || || || |||||||||||| | ||||||| Sbjct 678 ACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAA 737 Query 155233 TGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 155292 ||||| ||||| |||||||||| |||| | || | |||||| | | || | | Sbjct 738 TGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 797 Query 155293 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGT 155352 | ||| |||||| ||||||||||| || |||||| || ||||| |||||||| | Sbjct 798 TCTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCT 857 Query 155353 GTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGT 155412 |||||||| || || || || | ||||| |||||| ||| | | || || ||||| Sbjct 858 GTTGCATATTCCGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGT 917 Query 155413 CAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 155472 ||||| ||| ||||||| |||||||| || || | ||||||||| |||| ||| | Sbjct 918 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTATGGTACTTTCAACTTCATGATT 977 Query 155473 GTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGT 155532 || ||||| || || ||||| |||||||||||||| || |||||| | || ||||| ||| Sbjct 978 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 1037 Query 155533 GTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATC 155592 || ||||| || || || ||| ||||||||| ||||| ||||| || ||| | ||| Sbjct 1038 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 1097 Query 155593 CGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 155652 | ||||| || || | || ||| || | ||||| | ||||| ||||| |||||| Sbjct 1098 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAGAGATTCGGTCAAGAGGAAGAA 1157 Query 155653 ACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCC 155712 |||||||| || || || |||||||| || || || || | |||||||| ||||| Sbjct 1158 ACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 1217 Query 155713 TTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGG 155772 ||||||||||| | | ||||||||||| ||||| |||||||| || | |||||| Sbjct 1218 TTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGG 1277 Query 155773 GCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 155832 |||||| | ||| | || |||||||||||||| || || ||||| |||||||| Sbjct 1278 TTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATGGCTTCAATTTCAACCAA 1337 Query 155833 TCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGC 155889 |||||||| || |||| || || || ||| ||||| || || | ||||| Sbjct 1338 TCTGTAGTTGA---TAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAACCGT 1394 Query 155890 GCTGGTCTTGGTATGG 155905 ||| |||||||||| Sbjct 1395 GCTAACCTTGGTATGG 1410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584785774115160