Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq131 610 7e-170 seq5 565 3e-156 seq21 515 4e-141 >seq131 Length=2205 Score = 610 bits (676), Expect = 7e-170 Identities = 735/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 157580 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 157639 ||||| | ||| ||||| |||| | ||||| || || |||| ||||| || || || Sbjct 1330 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1271 Query 157640 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157698 ||||| || || | ||| | ||||| ||||| || || | |||||| | || ||||| Sbjct 1270 ATGATCCCTACCTTATTGACCGCAACT-TCTGTGTTTATTATTGCCTTCATTGCCGCTCC 1212 Query 157699 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 157758 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 1211 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 1152 Query 157759 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 157818 || ||||| ||||| || | || |||| || || ||| | ||||| ||||| || Sbjct 1151 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAAT 1092 Query 157819 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 157878 |||||||| ||||| ||||||| ||| | || || |||||||||| |||| | || Sbjct 1091 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1032 Query 157879 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 157938 | |||||| | ||||| | | |||||||| ||||||||||| ||| | ||| Sbjct 1031 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 972 Query 157939 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 157998 | | |||||||| || ||||| ||| |||||||| ||||| || || || || | || Sbjct 971 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 912 Query 157999 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158058 ||| ||| | |||| || | |||||||| ||| || |||| ||||||||| || || Sbjct 911 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 852 Query 158059 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158118 ||||||||||| |||| |||| |||||||||| || || ||||||||||||||||| || Sbjct 851 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCC 792 Query 158119 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 158178 || || ||| | || || ||||| |||||||| || || || ||| ||||||||| || Sbjct 791 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 732 Query 158179 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 158237 | || |||| || | | || | ||||| || |||| || || || | | Sbjct 731 TTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 673 Query 158238 GTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 158297 |||||| ||||||||||||||||| || ||||| ||||| || || ||||| || || | Sbjct 672 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 613 Query 158298 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158357 | || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| | Sbjct 612 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAG 553 Query 158358 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 158417 |||| |||||||| || || ||||||||||| || | || || || |||||||||| Sbjct 552 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGTACTATGGCATTCA 493 Query 158418 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158477 |||| || |||||||| || ||||| || | ||||| | || || ||||| | || | Sbjct 492 ACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATA 433 Query 158478 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158537 | ||||| ||| | | ||||| ||| || |||||||||||||||||||| ||||| | Sbjct 432 CTTGGGCTGATATTATCAACCGTGCTAACCTGGGTATGGAAGTTATGCATGAACGTAATG 373 Query 158538 CACACAACTTCCCACTCGACCTTGCTGCTGCTGA 158571 | || |||||||| || || || ||||||| ||| Sbjct 372 CTCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 339 >seq5 Length=20976 Score = 565 bits (626), Expect = 3e-156 Identities = 692/939 (74%), Gaps = 4/939 (0%) Strand=Plus/Plus Query 157580 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 157639 ||||| | ||| |||| ||| | ||||| || || | || |||||||| || || Sbjct 474 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 533 Query 157640 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157698 ||||| || || | ||| | ||||| || || || || | |||||| | |||||||| Sbjct 534 ATGATCCCTACCTTATTGACCGCAACT-TCGGTATTTATTATTGCCTTCATTGCTGCTCC 592 Query 157699 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 157758 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 593 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 652 Query 157759 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 157818 || |||| ||||| || | || |||| || || ||| | ||||| || || || Sbjct 653 TATTCTCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAAT 712 Query 157819 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 157878 ||||||||| ||||| ||||||| ||| | || ||||||||||||| |||| | || Sbjct 713 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 772 Query 157879 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 157938 | |||||| | ||||| | | | |||||||| ||||||||||||||| | ||| Sbjct 773 TCTACACTTCTTACTTGGTGTAGCTTCTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 832 Query 157939 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 157998 | | |||||||| || ||||| ||| |||||||| ||||| || || || || | || Sbjct 833 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCCGCTCCTGTTGCAGCTGCTACCGC 892 Query 157999 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158058 ||| ||| | |||| || |||||||||| ||| || |||| ||||||||| || || Sbjct 893 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 952 Query 158059 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158118 | ||||||||| |||| |||| |||||||||| || || |||||||||||||||||||| Sbjct 953 TTATGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 1012 Query 158119 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 158178 || || ||| | || || ||||| |||||||| || || || ||| ||||||||| || Sbjct 1013 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 1072 Query 158179 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 158237 | || |||| || | | || | ||||| || |||| || || || | | Sbjct 1073 TTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 1131 Query 158238 GTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 158297 |||| | ||||||||||||||||| || ||||| ||||| || || ||||| || || | Sbjct 1132 GTTAGAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 1191 Query 158298 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158357 | || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| | Sbjct 1192 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAG 1251 Query 158358 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 158417 |||| |||||||| || || ||||||||||| || | || || ||| |||||||||| Sbjct 1252 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCA 1311 Query 158418 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158477 |||| || || ||||| |||||||| || | ||||| |||| || ||||| | || | Sbjct 1312 ACCTAAATGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 1371 Query 158478 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGG 158516 | ||||| ||| | | ||||| ||| |||||||||| Sbjct 1372 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGG 1410 >seq21 Length=7990 Score = 515 bits (570), Expect = 4e-141 Identities = 720/1007 (71%), Gaps = 2/1007 (0%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | || || || |||||||| || ||||| || ||| | || || Sbjct 1056 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 1115 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 1116 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 1175 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || ||||| || | || ||||||||| | || || ||| || | ||||| || || Sbjct 1176 TATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGTAATTTCTTAACAGCCGCAGTT 1235 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 159545 || || |||||| | | | | |||||| | | |||| ||||||||||| | || Sbjct 1236 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGGTCCTGAAGCACAA 1295 Query 159546 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGT 159605 || |||| || ||||| ||| | || || | |||| |||||| || || || || Sbjct 1296 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTGCATGGC 1355 Query 159606 GCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTAT 159664 || || | ||||| ||||||||| | ||||| ||||| || || || ||| | | | Sbjct 1356 GCTTTTGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCCCGATCTGTTCAAT-T 1414 Query 159665 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 159724 || ||||| ||||| || || |||||||| || |||||||||||||| || ||||| Sbjct 1415 GCGACCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGTTTTTGTTTCTGTATTCCT 1474 Query 159725 CATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 159784 || || ||| | || ||||| ||||||| || || || ||||| || ||||| || Sbjct 1475 GATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTAT 1534 Query 159785 CTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATAT 159844 ||||||||| | | || ||||||||||||| || |||||| | || || || ||||| Sbjct 1535 ATTTAGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCTGAACCCATTTCATAT 1594 Query 159845 GATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGT 159904 |||||||||||| ||| || | || | || | || | || || ||||| | |||||| Sbjct 1595 GATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACTGT 1654 Query 159905 AGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAAC 159964 ||| || || | | ||||||||| || |||||||| ||| || ||| | |||| Sbjct 1655 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGCTTTTAACCCAAC 1714 Query 159965 TCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 160024 ||||| ||| || || || || ||||||||||| |||||||| ||||| || ||||| || Sbjct 1715 TCAAGCGGAAGAAACCTATTCCATGGTCACTGCGAACCGCTTTTGGTCCCAAATCTTTGG 1774 Query 160025 TATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGGG 160084 |||| ||||| || || || ||| | |||||||| ||||| ||||| || || | || Sbjct 1775 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 1834 Query 160085 TCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGATTT 160144 | | |||| || |||| | | || | || || || || ||||| ||||| || Sbjct 1835 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTACGTGCCTACGACTT 1894 Query 160145 CGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 160204 ||| ||| || || | ||||| |||||||| ||||||||||| |||||||||||||| Sbjct 1895 CGTTTCTCAGGAAATTCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 1954 Query 160205 CATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAAAA 160264 || ||||| |||||||| | || || ||| |||| || ||||| || |||||||| Sbjct 1955 TATTCTATTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 2014 Query 160265 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 | |||| ||||| || || || | || | || ||||| ||||||| Sbjct 2015 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 2061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548328055508520