Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq131 506 2e-138 seq5 466 2e-126 seq21 385 5e-102 >seq131 Length=2205 Score = 506 bits (560), Expect = 2e-138 Identities = 714/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| || || || || | ||| | || ||||||||||| || Sbjct 1330 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1271 Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCT-TGTTTCATTGTAGCATTCATCGCTGCTC 72352 |||||||| | ||| | || || || || ||||| ||| | || ||||| || |||| Sbjct 1270 ATGATCCC-TACCTTATTGACCGCAACTTCTGTGTTT-ATTATTGCCTTCATTGCCGCTC 1213 Query 72353 CTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACA 72412 ||||||| ||||| || || || | ||||| ||| | || ||| | | || || |||| Sbjct 1212 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 1153 Query 72413 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 72472 | || ||||| ||||| | |||| |||| || || || || ||||| ||||| | Sbjct 1152 ATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAA 1093 Query 72473 TCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTA 72532 | ||||||||||| | | || || ||||| || || || |||||||| | || || Sbjct 1092 TTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 1033 Query 72533 TTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACA 72592 || | |||||| | |||| | || ||||||||| | ||||||| || | | Sbjct 1032 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 973 Query 72593 GACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTG 72652 | || || ||| |||||||||| ||| ||||| ||||| ||||| | || || | Sbjct 972 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 913 Query 72653 CAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 72712 | || ||| | | || ||| | ||||| || || |||||||||||||| ||||| | Sbjct 912 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 853 Query 72713 TCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACC 72772 | || ||||| |||||||||||| | || ||||| || || |||||||| || ||||| | Sbjct 852 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATC 793 Query 72773 CCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACG 72832 | || || ||| ||| ||||| ||| | ||||| ||| || |||||||| ||||| | Sbjct 792 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 733 Query 72833 GTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACG 72892 |||| | || ||||| | | ||||| || || ||||| || || | || | | Sbjct 732 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 673 Query 72893 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 72952 | || | ||||| ||||| |||||||| ||||| || || || |||||||| || || | Sbjct 672 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 613 Query 72953 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 73012 | |||| |||||||| ||||| ||||||||||| ||||| |||||||||||||| | Sbjct 612 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAG 553 Query 73013 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCA 73072 ||| | |||||||| || | ||||| || | | |||||| |||| |||||||||| Sbjct 552 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGTACTATGGCATTCA 493 Query 73073 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCA 73131 |||| || || ||||| || |||||||| || || ||| || || || | | Sbjct 492 ACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAA-GGCCGTGTAATTAAT 434 Query 73132 ACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAAT 73191 || |||| ||| || | ||| | || ||||| || |||||||||||||||||| | ||| Sbjct 433 ACTTGGGCTGATATTATCAACCGTGCTAACCTGGGTATGGAAGTTATGCATGAACGTAAT 374 Query 73192 GCACACAACTTCCCACTAGACCTAGCATCTGCTGA 73226 || || |||||||| ||||| ||||| ||| ||| Sbjct 373 GCTCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 339 >seq5 Length=20976 Score = 466 bits (516), Expect = 2e-126 Identities = 631/877 (72%), Gaps = 2/877 (0%) Strand=Plus/Plus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| ||| || || || | ||| |||| ||||| ||||| || Sbjct 474 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 533 Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353 |||||||| | ||| | || || || | || ||| | || ||||| |||||||| Sbjct 534 ATGATCCC-TACCTTATTGACCGCAACTTCGGTATTTATTATTGCCTTCATTGCTGCTCC 592 Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 72413 |||||| ||||| || || || | ||||| ||| | || ||| | | || || ||||| Sbjct 593 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 652 Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473 || |||| ||||| | |||| |||| || || || || ||||| || || || Sbjct 653 TATTCTCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAAT 712 Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTAT 72533 |||||||||||| | | || || ||||| || ||||| |||||||| | || || | Sbjct 713 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 772 Query 72534 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593 | | |||||| | |||| | || | ||||||||| | |||||||||| | | | Sbjct 773 TCTACACTTCTTACTTGGTGTAGCTTCTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 832 Query 72594 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 72653 || || ||| |||||||||| ||| ||||| || || ||||| | || || || Sbjct 833 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCCGCTCCTGTTGCAGCTGCTACCGC 892 Query 72654 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 72713 || ||| | | || ||| ||||||| || || |||||||||||||| ||||| || Sbjct 893 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 952 Query 72714 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 72773 | ||||| |||||||||||| | || ||||| || || |||||||| || |||||||| Sbjct 953 TTATGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 1012 Query 72774 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 72833 || || ||| ||| ||||| ||| | ||||| || || |||||||| ||||| || Sbjct 1013 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 1072 Query 72834 TTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGG 72893 ||| | || ||||| | | ||||| || || ||||| || || | || | || Sbjct 1073 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 1132 Query 72894 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 72953 || | ||||| ||||| |||||||| ||||| || || || |||||||| || || || Sbjct 1133 TTAGAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 1192 Query 72954 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 73013 |||| |||||||| ||||| ||||||||||||||||| |||||||||||||| || Sbjct 1193 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGC 1252 Query 73014 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAA 73073 || | |||||||| || | ||||| || | | |||||| | || ||||||||||| Sbjct 1253 TGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAA 1312 Query 73074 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 73110 ||| || || ||||| ||||||||||| || || ||| Sbjct 1313 CCTAAATGGCTTCAATTTCAACCAATCTGTAGTTGAT 1349 >seq21 Length=7990 Score = 385 bits (426), Expect = 5e-102 Identities = 709/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 73364 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 73423 ||||| || | ||||| |||||| ||| || |||||||| || | || ||||| ||| Sbjct 1044 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 1103 Query 73424 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 73483 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 1104 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 1163 Query 73484 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTA 73543 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 1164 GTAACTTCATGGTATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGTAATTTCTTA 1223 Query 73544 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGA 73603 || || ||||| || || |||| | || | | | ||| | ||||||| || ||||| Sbjct 1224 ACAGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGGT 1283 Query 73604 CCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 73663 || || |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 1284 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 1343 Query 73664 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 73723 || | ||||| | |||||||| |||||||||||| | | || |||||| |||| || Sbjct 1344 GCTCTGCATGGCGCTTTTGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCCCGA 1403 Query 73724 CTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACG 73783 |||| | || ||||| || ||| | || || || | || || || || Sbjct 1404 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGTTTTTGTT 1463 Query 73784 AGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGT 73843 | || || || ||||| |||| ||| | |||||||||| |||||| || ||| Sbjct 1464 TCTGTATTCCTGATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGGT 1523 Query 73844 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 73903 || ||||| || ||| | | || | || | || || || || ||| || || || Sbjct 1524 GTAGCAGCTATATTTAGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCTGAAC 1583 Query 73904 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 73963 ||||||||||||||||| || || ||| || | || | || || ||||| || || ||| Sbjct 1584 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCAT 1643 Query 73964 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 74023 ||||| || ||| | || || || | |||||| || | | | | Sbjct 1644 GGTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 1686 Query 74024 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATT 74083 ||| |||| |||| | || || | || || || | ||||| || ||| ||| | Sbjct 1687 CAA-ATACA--TTTC-GTGCTTTTAACCCAACTCAAGCGGAAGAAACCTATTCCATGGTC 1742 Query 74084 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 74143 ||||| ||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 1743 ACTGCGAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 1802 Query 74144 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 74203 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 1803 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 1862 Query 74204 GGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 74263 ||| | || || ||||| | || |||||||| || ||||| || || | ||||| ||| Sbjct 1863 GGTTTGGCCCTGAACCTACGTGCCTACGACTTCGTTTCTCAGGAAATTCGCGCAGCGGAA 1922 Query 74264 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 74323 || || || ||||| || |||||||| || || ||||| | || |||||||| | || Sbjct 1923 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGCGCT 1982 Query 74324 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 74383 |||||| | || ||||| || ||||| ||| || | ||||| || || || | ||| Sbjct 1983 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 2042 Query 74384 CGAGGCAACGCACTATAA 74401 || || ||||| || ||| Sbjct 2043 CGTGGAAACGCTCTTTAA 2060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572825185019880