Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20centranthifolius_20[genbank_20GCA_5F000737435.1_202014- 08-04] 6,761 sequences; 4,471,593 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq21 627 1e-174 seq131 598 5e-166 seq5 580 1e-160 >seq21 Length=7990 Score = 627 bits (694), Expect = 1e-174 Identities = 749/1014 (74%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || || || || ||||| |||||||| || Sbjct 1044 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 1103 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| ||| ||| | || | || |||||| | || || || || ||| Sbjct 1104 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 1163 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558 | || ||||| ||||| || | || |||||||| | ||||| |||||| | Sbjct 1164 GTAACTTCATGGTATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGTAATTTCTTA 1223 Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 1224 ACAGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGGT 1283 Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678 ||||| | ||||| || || || ||||| ||| | || || | ||| | |||||| Sbjct 1284 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 1343 Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737 ||||| || || || || | || |||||||| ||| |||| |||||||| |||| || Sbjct 1344 GCTCTGCATGGCGCTTTTGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCCCGA 1403 Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797 ||| ||| | || ||||| ||||| || || |||||||| || |||||||||||||| Sbjct 1404 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGTTTTTGT 1462 Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857 |||||||| || |||||||| || |||||| |||||||||||||||||||| || Sbjct 1463 TTCTGTATTCCTGATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGG 1522 Query 159858 GGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAA 159917 |||||||| || ||||||||| | | || |||| || || || || ||||| || || Sbjct 1523 TGTAGCAGCTATATTTAGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCTGAA 1582 Query 159918 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCA 159977 ||| || ||||||||||||||||| ||| || | || | || || | || || || || Sbjct 1583 CCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCA 1642 Query 159978 TGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGC 160037 ||||||||||||||| || || || ||||||||||| || ||||| |||||| || Sbjct 1643 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGC 1702 Query 160038 GTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 160097 ||| | || ||||||| ||||| || ||||| ||||||||||| |||||||| ||||| Sbjct 1703 TTTTAACCCAACTCAAGCGGAAGAAACCTATTCCATGGTCACTGCGAACCGCTTTTGGTC 1762 Query 160098 GCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 160157 || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 1763 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 1822 Query 160158 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCG 160217 || || | ||| |||||| || |||| | | ||| | || | ||||| || Sbjct 1823 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTACG 1882 Query 160218 TGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTT 160277 ||| ||||| ||||| |||||| ||| | ||||| |||||||||||||||||||| || Sbjct 1883 TGCCTACGACTTCGTTTCTCAGGAAATTCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 1942 Query 160278 CTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATCA 160337 ||||||||| || || ||||| || ||||| |||| ||||||||||| || ||||| Sbjct 1943 CTACACCAAAAATATTCTATTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCA 2002 Query 160338 ACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 || ||||||||| |||| ||||||||||| || ||||| | || ||||| || Sbjct 2003 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 2056 >seq131 Length=2205 Score = 598 bits (662), Expect = 5e-166 Identities = 735/997 (74%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| |||| ||| | |||||| | || | || ||||| ||||| | Sbjct 1331 CTTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTT 1272 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| ||||| || || | |||||| | || |||| Sbjct 1271 GATGATCCCTACCTTATTGACCGCAACT-TCTGTGTTTATTATTGCCTTCATTGCCGCTC 1213 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || ||||| ||| |||| || || | || || |||| Sbjct 1212 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 1153 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || ||||| ||||| || |||||| ||| || |||||| | ||||| || || | Sbjct 1152 ATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAA 1093 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 | |||||||||||||| |||| || ||| | || || |||||||||| |||| | | Sbjct 1092 TTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 1033 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||||| | | || | | || ||||| ||||||||||| || || || Sbjct 1032 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 973 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | |||||||| || ||||| ||| |||||||| ||||| || || || || | | Sbjct 972 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 913 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 | || ||| | |||| || | |||||||| ||| || |||| ||||||||| || | Sbjct 912 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 853 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 | ||||||||||| |||| |||| |||||||||| || || ||||||||||||||||| | Sbjct 852 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATC 793 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 792 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 733 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 | | || ||||| | | | || | ||||| || |||| || || || | Sbjct 732 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 674 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392 ||||| | ||||||||||| ||||| || || || ||||| || || ||||| || || Sbjct 673 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 614 Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452 || || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| Sbjct 613 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTA 554 Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510 ||||| |||||||| || || ||||||||||| || | || | ||| || ||||||| Sbjct 553 GCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGG--TATCAGTACTATGGCAT 496 Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 158570 ||||||| || |||||||| || ||||| || | ||||| | || || ||||| | | Sbjct 495 TCAACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTA 436 Query 158571 ACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTA 158630 | || ||||| ||| | | ||||| ||| || |||||||||||||||||||| |||| Sbjct 435 ATACTTGGGCTGATATTATCAACCGTGCTAACCTGGGTATGGAAGTTATGCATGAACGTA 376 Query 158631 ACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667 | || || |||||||| || ||||| ||||||| ||| Sbjct 375 ATGCTCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 339 >seq5 Length=20976 Score = 580 bits (642), Expect = 1e-160 Identities = 698/942 (74%), Gaps = 8/942 (1%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| ||||| ||| | |||||| | || |||| ||||||||||| | Sbjct 473 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTT 532 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| || || || || | |||||| | ||||||| Sbjct 533 GATGATCCCTACCTTATTGACCGCAACT-TCGGTATTTATTATTGCCTTCATTGCTGCTC 591 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || ||||| ||| |||| || || | || || |||| Sbjct 592 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 651 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || |||| ||||| || |||||| ||| || |||||| | ||||| ||||| | Sbjct 652 ATATTCTCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAA 711 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 |||||||||||||||| |||| || ||| | || ||||||||||||| |||| | | Sbjct 712 TCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 771 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||||| | | || | | | || ||||| |||||||||||||| || || Sbjct 772 TTCTACACTTCTTACTTGGTGTAGCTTCTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 831 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | |||||||| || ||||| ||| |||||||| ||||| || || || || | | Sbjct 832 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCCGCTCCTGTTGCAGCTGCTACCG 891 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 | || ||| | |||| || |||||||||| ||| || |||| ||||||||| || | Sbjct 892 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 951 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 | | ||||||||| |||| |||| |||||||||| || || ||||||||||||||||||| Sbjct 952 TTTATGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 1011 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 1012 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 1071 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 | | || |||| || | | || | ||||| || |||| || || || | Sbjct 1072 GTTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 1130 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392 ||||| | ||||||||||| ||||| || || || ||||| || || ||||| || || Sbjct 1131 GGTTAGAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 1190 Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452 || || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| Sbjct 1191 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTA 1250 Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510 ||||| |||||||| || || ||||||||||| | ||| || ||| || ||||||| Sbjct 1251 GCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTG--CTTTAGGTATCAGCACTATGGCAT 1308 Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 158570 ||||||| || || ||||| |||||||| || | ||||| |||| || ||||| | | Sbjct 1309 TCAACCTAAATGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTA 1368 Query 158571 ACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGG 158612 | || ||||| ||| | | ||||| ||| |||||||||| Sbjct 1369 ATACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGG 1410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572975572309200