Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq2 576 4e-160
>seq2
Length=21306
Score = 576 bits (638), Expect = 4e-160
Identities = 725/993 (73%), Gaps = 2/993 (0%)
Strand=Plus/Plus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || |||||||| ||||| ||||| | || |||||||| || |
Sbjct 19977 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 20036
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| | ||||| || || || ||
Sbjct 20037 ATGATCCCTACCTTATTGACCGCAACTTCTGTGTTTATTATTGCCTTCATTGCCGCTCCT 20096
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||||||| ||||| || ||||| || ||||| || || || | ||||||||||||
Sbjct 20097 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAAT 20156
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||| || || || | |||| | || || || || ||||||||||||| ||
Sbjct 20157 ATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAATT 20216
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | | | ||||| ||||||||||| || ||||| ||| |||| ||||
Sbjct 20217 TGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTT 20276
Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649
| ||||||||| | || ||||| ||| ||| | ||||||| || || | |
Sbjct 20277 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGT 20336
Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709
| || ||| |||| ||||| || |||||| |||| || | |||| ||| |||
Sbjct 20337 CTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCT 20396
Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768
|| ||||| | | |||||| |||| ||||| |||||| ||||||||||||||| || ||
Sbjct 20397 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 20455
Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828
||||||||||| ||||| ||| | |||||||| || || ||||| ||||||||||||||
Sbjct 20456 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCC 20515
Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888
|| |||||| | || || ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 20516 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 20575
Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948
||||| ||||| | |||| |||||| || || ||| ||| || | ||
Sbjct 20576 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 20635
Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008
|| | ||||| ||||| ||||| || |||||||| || || || || || || |||||
Sbjct 20636 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 20695
Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068
||||||| || ||||||||| |||||| || || ||||| ||||| ||||| || ||
Sbjct 20696 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGC 20755
Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128
| ||| || || || || || ||| |||| | | || ||| | |||||||| |||||
Sbjct 20756 TGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCAA 20815
Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAAC 20188
||| |||||||| || |||||||| || ||||||||| | | || |||| ||
Sbjct 20816 CCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATAC 20875
Query 20189 ATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGC 20248
||||||||| | | || | |||||||| || | ||||||||||| || || |||||
Sbjct 20876 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 20935
Query 20249 TCATAACTTCCCACTTGATTTAGCTTCGGCTGA 20281
|||||||||||| || ||| ||||| | | |||
Sbjct 20936 TCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 20968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144432126707388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |