Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq2 515 6e-141 >seq2 Length=21306 Score = 515 bits (570), Expect = 6e-141 Identities = 681/942 (72%), Gaps = 2/942 (0%) Strand=Plus/Plus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGT 211670 || |||||||||||| | |||||||| | ||| | | | ||||| | ||||| | Sbjct 20019 GGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTGTTTATTAT 20077 Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730 || ||||| || || ||||| || ||||| || || || |||||||| || |||| || Sbjct 20078 TGCCTTCATTGCCGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 20137 Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790 | | || || ||||| || ||||| ||||| || |||| |||| || ||||| Sbjct 20138 TCTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGG 20197 Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGG 211850 ||| ||||| ||||| || |||||||||||| | ||||||| ||| | ||||||||||| Sbjct 20198 TTTGCACTTTTATCCAATTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGG 20257 Query 211851 TCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACA 211910 |||||| | | | | | |||||| | | || | | |||||||| | | Sbjct 20258 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 20317 Query 211911 GTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACC 211970 |||||| ||| | |||| | |||||||| |||||||| |||||| |||||||| || Sbjct 20318 GTGGGAGCTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCC 20377 Query 211971 TGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGA 212030 ||| |||| ||| |||||| ||| | | |||||| | ||||| || || || || Sbjct 20378 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGA 20437 Query 212031 CGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACA 212090 ||||||||| |||| || || || || |||||||||||| | |||||||| || || || Sbjct 20438 TGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 20497 Query 212091 TAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATT 212150 |||||||||||||| ||||| || ||| ||| || || ||| | ||||| || | | Sbjct 20498 CAACATCCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCT 20557 Query 212151 ATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTT 212210 |||| ||||||||| ||||| | || || ||| | ||| | |||||||| | Sbjct 20558 ATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 20617 Query 212211 AGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGC 212270 || || || | ||||||| ||||| ||||| ||||| || ||||| ||||| || Sbjct 20618 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 20677 Query 212271 TGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAG 212330 || ||||| || || || || | |||||||| ||||| ||||||||| | Sbjct 20678 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTC 20737 Query 212331 TTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTAT 212390 |||||||||||||| || | |||||||| | || | ||||| || || | ||||| Sbjct 20738 GTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTAT 20797 Query 212391 CTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATC 212450 | | || |||||||||||||||||||| ||||| || |||||||| || |||||| Sbjct 20798 CAGTACTATGGCATTCAACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCA 20857 Query 212451 AGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGT 212510 ||| || || |||||||| |||| || | ||| | || ||||||||||||||||| Sbjct 20858 AGGCCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGT 20917 Query 212511 TATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||| ||| | ||||| || |||||||| || || |||| Sbjct 20918 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 20959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807499448407880