Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq2 515 6e-141
>seq2
Length=21306
Score = 515 bits (570), Expect = 6e-141
Identities = 681/942 (72%), Gaps = 2/942 (0%)
Strand=Plus/Plus
Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGT 211670
|| |||||||||||| | |||||||| | ||| | | | ||||| | ||||| |
Sbjct 20019 GGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTGTTTATTAT 20077
Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730
|| ||||| || || ||||| || ||||| || || || |||||||| || |||| ||
Sbjct 20078 TGCCTTCATTGCCGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 20137
Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790
| | || || ||||| || ||||| ||||| || |||| |||| || |||||
Sbjct 20138 TCTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGG 20197
Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGG 211850
||| ||||| ||||| || |||||||||||| | ||||||| ||| | |||||||||||
Sbjct 20198 TTTGCACTTTTATCCAATTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGG 20257
Query 211851 TCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACA 211910
|||||| | | | | | |||||| | | || | | |||||||| | |
Sbjct 20258 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 20317
Query 211911 GTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACC 211970
|||||| ||| | |||| | |||||||| |||||||| |||||| |||||||| ||
Sbjct 20318 GTGGGAGCTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCC 20377
Query 211971 TGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGA 212030
||| |||| ||| |||||| ||| | | |||||| | ||||| || || || ||
Sbjct 20378 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGA 20437
Query 212031 CGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACA 212090
||||||||| |||| || || || || |||||||||||| | |||||||| || || ||
Sbjct 20438 TGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 20497
Query 212091 TAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATT 212150
|||||||||||||| ||||| || ||| ||| || || ||| | ||||| || | |
Sbjct 20498 CAACATCCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCT 20557
Query 212151 ATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTT 212210
|||| ||||||||| ||||| | || || ||| | ||| | |||||||| |
Sbjct 20558 ATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 20617
Query 212211 AGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGC 212270
|| || || | ||||||| ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 20618 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 20677
Query 212271 TGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAG 212330
|| ||||| || || || || | |||||||| ||||| ||||||||| |
Sbjct 20678 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTC 20737
Query 212331 TTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTAT 212390
|||||||||||||| || | |||||||| | || | ||||| || || | |||||
Sbjct 20738 GTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTAT 20797
Query 212391 CTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATC 212450
| | || |||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct 20798 CAGTACTATGGCATTCAACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCA 20857
Query 212451 AGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGT 212510
||| || || |||||||| |||| || | ||| | || |||||||||||||||||
Sbjct 20858 AGGCCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGT 20917
Query 212511 TATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552
|||||| ||| | ||||| || |||||||| || || ||||
Sbjct 20918 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 20959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807499448407880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |