Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq2 524 9e-144
>seq2
Length=21306
Score = 524 bits (580), Expect = 9e-144
Identities = 697/968 (72%), Gaps = 0/968 (0%)
Strand=Plus/Plus
Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758
||| |||| || || | ||||| | || | || ||||| ||||| |||||||||||
Sbjct 19986 TGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 20045
Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818
|||| | ||| | | ||||| |||| ||||| || ||||| || || ||
Sbjct 20046 ACCTTATTGACCGCAACTTCTGTGTTTATTATTGCCTTCATTGCCGCTCCTCCAGTAGAT 20105
Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878
|| ||||| || | |||||||| | || || | | || || ||||| || |||||
Sbjct 20106 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATCTCA 20165
Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938
||||| || |||| |||| || |||||| | ||||| ||||| ||||||||||||
Sbjct 20166 GGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAATTTGGGAAGCA 20225
Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998
||| | | ||||| ||||| || || |||||||||||| || || || | | ||||||
Sbjct 20226 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTC 20285
Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058
| | || | || ||||||||| | ||||||| || | |||| | ||||||
Sbjct 20286 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTGGGTATG 20345
Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118
|| |||||||| ||| |||||||| ||||| || |||| || |||||| |||||
Sbjct 20346 CGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTG 20405
Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178
| || || | ||||| ||| ||| || || || ||||||||||| || || |||||
Sbjct 20406 ATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACT 20465
Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238
|| ||||||||| | |||||||| || ||||||||||| |||||||| ||||| || |||
Sbjct 20466 TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCCATTTCACATG 20525
Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298
||| || |||||| | ||||| || | || ||| || ||||| ||||| | |||
Sbjct 20526 TTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 20585
Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358
|| ||| | | ||||| || || ||||| || || || || | || |||| ||||
Sbjct 20586 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 20645
Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418
|| ||||| |||||||| || || || || || || ||||| || ||||| || | |||
Sbjct 20646 GGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 20705
Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478
|||||||||||||| || ||||| ||| | ||||||||||| ||| | | |||
Sbjct 20706 TTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCT 20765
Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538
||||| | |||||||| ||| | | ||||| | || |||||||| ||||| |||||
Sbjct 20766 GTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCAACCTAAATGGT 20825
Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598
|| || || ||||| || | || ||| | || ||| || ||| ||||| ||
Sbjct 20826 TTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATACTTGGGCTGAT 20885
Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658
|| | ||| | || ||||| ||||||||||| |||||||| |||||||| || ||||||
Sbjct 20886 ATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 20945
Query 170659 CCACTTGA 170666
|| || ||
Sbjct 20946 CCTCTAGA 20953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582807761631200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |