Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq2 524 9e-144 >seq2 Length=21306 Score = 524 bits (580), Expect = 9e-144 Identities = 697/968 (72%), Gaps = 0/968 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| || || | ||||| | || | || ||||| ||||| ||||||||||| Sbjct 19986 TGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 20045 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| |||| ||||| || ||||| || || || Sbjct 20046 ACCTTATTGACCGCAACTTCTGTGTTTATTATTGCCTTCATTGCCGCTCCTCCAGTAGAT 20105 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | |||||||| | || || | | || || ||||| || ||||| Sbjct 20106 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATCTCA 20165 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| ||||| |||||||||||| Sbjct 20166 GGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAATTTGGGAAGCA 20225 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || |||||||||||| || || || | | |||||| Sbjct 20226 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTC 20285 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | ||||||| || | |||| | |||||| Sbjct 20286 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTGGGTATG 20345 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || |||||| ||||| Sbjct 20346 CGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTG 20405 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| ||| || || || ||||||||||| || || ||||| Sbjct 20406 ATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACT 20465 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | |||||||| || ||||||||||| |||||||| ||||| || ||| Sbjct 20466 TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCCATTTCACATG 20525 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 20526 TTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 20585 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 20586 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 20645 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || ||||| || ||||| || | ||| Sbjct 20646 GGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 20705 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || ||||| ||| | ||||||||||| ||| | | ||| Sbjct 20706 TTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCT 20765 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 ||||| | |||||||| ||| | | ||||| | || |||||||| ||||| ||||| Sbjct 20766 GTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCAACCTAAATGGT 20825 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || || ||||| || | || ||| | || ||| || ||| ||||| || Sbjct 20826 TTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATACTTGGGCTGAT 20885 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || | ||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 20886 ATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 20945 Query 170659 CCACTTGA 170666 || || || Sbjct 20946 CCTCTAGA 20953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582807761631200