Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq2 628 3e-175
>seq2
Length=21306
Score = 628 bits (696), Expect = 3e-175
Identities = 732/985 (74%), Gaps = 2/985 (0%)
Strand=Plus/Minus
Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032
|| ||||| | ||||||||||| || |||||||| ||||| ||||||||||||||
Sbjct 20959 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 20900
Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092
||||| || | | ||| ||||| ||||| | |||||| ||||||||| || | |
Sbjct 20899 GCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCAACTACAGAT 20840
Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152
|| || || || || ||||| || || |||||||| || || | ||| | ||||| ||||
Sbjct 20839 TGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAAGCAGTAAAC 20780
Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212
|| || || || || ||||||||||| | ||| ||||| | ||||| ||||||||
Sbjct 20779 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAGTTGTTGAAA 20720
Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272
|||||| |||||||| | || || || || || ||||| || || ||||||||||||
Sbjct 20719 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 20660
Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332
|| || ||||||||||| ||||||| | || || |||||||||| ||||| | |
Sbjct 20659 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 20600
Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392
|| | | |||||| || | ||||||||||| ||| |||||| | || |||||||||
Sbjct 20599 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 20540
Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452
||||| || || ||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct 20539 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCCTGGAATACA 20480
Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512
| |||| ||||||| || || || || || || ||||| |||||||| ||| |||||
Sbjct 20479 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 20420
Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572
|| | || || | | ||| ||||| | || |||||||| ||||| || || ||||||
Sbjct 20419 CCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 20360
Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632
||||| || |||||||| ||||| | ||| ||||| ||||||||||||||| |
Sbjct 20359 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCCATGTAACAA 20300
Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692
| |||||| | |||||| | |||| |||| |||||| |||||||| |||| ||||
Sbjct 20299 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 20240
Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752
|| || | ||||||||||||||| ||||| || || | ||| ||||| ||| |
Sbjct 20239 TCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCTGCAGAAGTA 20180
Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812
|||| | |||||| || || || ||||||||||| | ||||| |||| || || |||
Sbjct 20179 GGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCA 20120
Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871
|| ||||| |||||||| ||||| || || ||| ||| ||||| || || ||||| |||
Sbjct 20119 CGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAACACAGA-AGT 20061
Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931
|| | | || || || ||||| | | |||||||| || | || | |||||| |
Sbjct 20060 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 20001
Query 84932 AGTGGAGGTGACCCAATCACAGAAG 84956
|| || | ||| | |||||||
Sbjct 20000 GGTACTAGTTATCCAGTTACAGAAG 19976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571234160698840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |