Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq2 628 3e-175 >seq2 Length=21306 Score = 628 bits (696), Expect = 3e-175 Identities = 732/985 (74%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||||||||| || |||||||| ||||| |||||||||||||| Sbjct 20959 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 20900 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | |||||| ||||||||| || | | Sbjct 20899 GCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCAACTACAGAT 20840 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || || || || || ||||| || || |||||||| || || | ||| | ||||| |||| Sbjct 20839 TGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAAGCAGTAAAC 20780 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||| | ||| ||||| | ||||| |||||||| Sbjct 20779 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAGTTGTTGAAA 20720 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || ||||| || || |||||||||||| Sbjct 20719 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 20660 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || ||||||||||| ||||||| | || || |||||||||| ||||| | | Sbjct 20659 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 20600 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | |||||| || | ||||||||||| ||| |||||| | || ||||||||| Sbjct 20599 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 20540 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||||||||| || || |||||||| ||| Sbjct 20539 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCCTGGAATACA 20480 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | |||| ||||||| || || || || || || ||||| |||||||| ||| ||||| Sbjct 20479 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 20420 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | || || | | ||| ||||| | || |||||||| ||||| || || |||||| Sbjct 20419 CCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 20360 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| || |||||||| ||||| | ||| ||||| ||||||||||||||| | Sbjct 20359 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCCATGTAACAA 20300 Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692 | |||||| | |||||| | |||| |||| |||||| |||||||| |||| |||| Sbjct 20299 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 20240 Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752 || || | ||||||||||||||| ||||| || || | ||| ||||| ||| | Sbjct 20239 TCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCTGCAGAAGTA 20180 Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812 |||| | |||||| || || || ||||||||||| | ||||| |||| || || ||| Sbjct 20179 GGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCA 20120 Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871 || ||||| |||||||| ||||| || || ||| ||| ||||| || || ||||| ||| Sbjct 20119 CGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAACACAGA-AGT 20061 Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931 || | | || || || ||||| | | |||||||| || | || | |||||| | Sbjct 20060 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 20001 Query 84932 AGTGGAGGTGACCCAATCACAGAAG 84956 || || | ||| | ||||||| Sbjct 20000 GGTACTAGTTATCCAGTTACAGAAG 19976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571234160698840