Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_016656.1
Length=45890
Score E
Sequences producing significant alignments: (Bits) Value
seq2 482 7e-132
>seq2
Length=21306
Score = 482 bits (534), Expect = 7e-132
Identities = 699/984 (71%), Gaps = 2/984 (0%)
Strand=Plus/Plus
Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861
|| ||| | ||| | || ||||| || |||||||| || | |||||||| || || |
Sbjct 19977 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 20036
Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920
||||| || |||| | | || ||| | ||| ||||| |||||||||| || || ||
Sbjct 20037 ATGATCCCTACCTTATTGACCGCAACTTC-TGTGTTTATTATTGCCTTCATTGCCGCTCC 20095
Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980
|| |||||||| ||||| || ||||| || ||||| || || || | |||||||||||
Sbjct 20096 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 20155
Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040
||| || ||||| || | | || | ||| || ||||| | || ||||| || ||
Sbjct 20156 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAAT 20215
Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100
|||||||| | | | || || ||| |||||||||| || || ||| |||| ||| |
Sbjct 20216 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 20275
Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160
| ||||||||| | || ||||| || || | ||||||| || || | |
Sbjct 20276 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 20335
Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220
|| || ||| |||| ||||| |||||||||| |||| || | | || ||| |||
Sbjct 20336 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 20395
Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280
|| ||||| | || || | || ||||| |||||| |||||| |||||||| || ||
Sbjct 20396 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 20455
Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340
||||||||||| ||||| ||| | |||||||| || || || || || || ||||| ||
Sbjct 20456 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCC 20515
Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400
||| || ||| || || ||||| || ||||| || | || ||| ||||||||| ||
Sbjct 20516 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 20575
Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGG 26460
||||| ||||| | || ||||| ||||| | | || ||| | ||
Sbjct 20576 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 20635
Query 26461 CTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 26520
|| | || || ||||| ||||| || |||||||| || || || || || || |||||
Sbjct 20636 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 20695
Query 26521 GAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGC 26580
|||| || || || ||||| ||||| || ||| ||||| | || ||||| || ||
Sbjct 20696 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAGC 20755
Query 26581 TACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAA 26640
| ||||||| || || || || ||| | || || | |||||| | || |||||||| ||
Sbjct 20756 TGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCAA 20815
Query 26641 CCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTAC 26700
|||||||||||| || |||||||| || ||||| ||| | || |||| |||
Sbjct 20816 CCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATAC 20875
Query 26701 ATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGC 26760
||||||||| | | ||||| |||||||| || | ||||||||||| || ||||||||
Sbjct 20876 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 20935
Query 26761 TCATAACTTTCCACTTGACTTAGC 26784
||||||||| || || || ||||
Sbjct 20936 TCATAACTTCCCTCTAGATCTAGC 20959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146716776857352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |