Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_016659.1
Length=47536
Score E
Sequences producing significant alignments: (Bits) Value
seq2 536 4e-148
>seq2
Length=21306
Score = 536 bits (594), Expect = 4e-148
Identities = 714/992 (72%), Gaps = 0/992 (0%)
Strand=Plus/Minus
Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503
||| ||| |||| || ||||||||||| || || ||||| |||||||||||||||||
Sbjct 20968 TCAACAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 20909
Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563
|| | || |||||||| | ||| ||||||||||| | || | || | | ||||
Sbjct 20908 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCA 20849
Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623
|| || || || || || || || || || || || || |||||||| || || | |
Sbjct 20848 ACTACAGATTGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAA 20789
Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683
|| |||| ||| || | || ||||||||||| |||||||| ||||| |||
Sbjct 20788 GCAGTAAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAG 20729
Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743
|| || || |||||||| |||||||| | || ||||| || |||||||| || || ||
Sbjct 20728 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 20669
Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803
||||| || ||||| ||||| |||||| | || || | || ||||||| | ||
Sbjct 20668 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 20609
Query 25804 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 25863
||||| | || | ||||| || | || ||||||||| ||||| | ||
Sbjct 20608 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 20549
Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 25923
|||||||| || || || || | ||| || || |||||||||||||| ||||| || |||
Sbjct 20548 CCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCC 20489
Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983
|| || |||| ||| || |||||||| || ||||| || ||||||||||||||||| |||
Sbjct 20488 TGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 20429
Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043
|| ||||| |||| ||||||| ||||| ||||| || ||||||||||| ||||||
Sbjct 20428 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAA 20369
Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103
|| || ||| ||||| || | ||| || || | ||||||| ||||| | || |||
Sbjct 20368 TATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCC 20309
Query 26104 AAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTA 26163
| |||| | | || | | ||||| | ||||| |||| ||| || ||||| ||
Sbjct 20308 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTG 20249
Query 26164 TACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 26223
|| ||||| || || | || ||| |||||||| ||||| || ||||| | |||||| ||
Sbjct 20248 TATAACCATTCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCT 20189
Query 26224 TTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 26283
||| | || | || || |||||||| || |||||||| || |||| | ||| ||
Sbjct 20188 GCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 20129
Query 26284 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 26343
||||| |||||||||||||| ||||| || ||||| || |||| || ||||| | |||
Sbjct 20128 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAAC 20069
Query 26344 GCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGG 26403
| | ||| || || | | ||||||||| | || |||||||| || | || ||
Sbjct 20068 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGA 20009
Query 26404 CGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435
||||| | ||||| || | ||||| ||| ||
Sbjct 20008 CGGTTTTCGGTACTAGTTATCCAGTTACAGAA 19977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151983631404748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |