Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq2 553 2e-152
seq1 542 3e-149
>seq2
Length=21306
Score = 553 bits (612), Expect = 2e-152
Identities = 722/994 (73%), Gaps = 4/994 (0%)
Strand=Plus/Plus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
||||| | ||| ||||| |||| | ||||| || || |||| ||||| || || ||
Sbjct 19977 TTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 20036
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||| || || | |||||| | || |||||
Sbjct 20037 ATGATCCCTACCTTATTGACCGCAACT-TCTGTGTTTATTATTGCCTTCATTGCCGCTCC 20095
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| || || ||||| || || |||| || || | || || |||||
Sbjct 20096 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 20155
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| ||||| ||||| || |||| |||| || || ||| | ||||| ||||| ||
Sbjct 20156 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAAT 20215
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190
|||||||| ||||| ||||||| ||| | || || |||||||||| |||| | ||
Sbjct 20216 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 20275
Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250
| |||||| | | || | | || ||||| ||||| ||||| ||| | ||
Sbjct 20276 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 20335
Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310
| |||||||| || ||||| ||| ||||| || || ||||||||||| || ||||
Sbjct 20336 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 20395
Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370
|| ||| || |||| || | |||||||| ||| ||||| | ||||| || || ||
Sbjct 20396 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 20455
Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430
||||| || ||||||| |||| |||| ||||| || |||||||||||||| ||||| ||
Sbjct 20456 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATCC 20515
Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || ||||| || || |||||||| ||||| || || || ||| || ||||||||
Sbjct 20516 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 20575
Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550
| || || ||| | || | || || || |||| ||| || || | ||
Sbjct 20576 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 20635
Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610
||||| || |||||||| ||||| || || || ||||| || || ||||| || || ||
Sbjct 20636 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 20695
Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAAC-AGCAGAAGTCTTCACTTCTTCCTGG 163669
|| ||||||||||||||||| ||||||||| || || | ||||||||||| |
Sbjct 20696 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGT-TACACTTCTTCCTAG 20754
Query 163670 CAGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCA 163729
| || |||||||| || || |||||||||||||| | || | || || ||||||||||
Sbjct 20755 CTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCA 20814
Query 163730 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACA 163789
|||| || |||||||| || ||||| || | ||||| | || || ||||| | || |
Sbjct 20815 ACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATA 20874
Query 163790 CTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 163849
||||||| || | | ||||| ||| || |||||||||||||||||||| ||||| |
Sbjct 20875 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 20934
Query 163850 CACACAACTTCCCACTCGATCTTGCTGCTGCTGA 163883
| || |||||||| || ||||| ||||||| |||
Sbjct 20935 CTCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 20968
>seq1
Length=29327
Score = 542 bits (600), Expect = 3e-149
Identities = 726/1007 (72%), Gaps = 2/1007 (0%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || || || |||||||| || ||||| || || | || ||
Sbjct 5457 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 5516
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 5517 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 5576
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| |||||||| | || ||||||| | ||||| ||| || | ||||| || ||
Sbjct 5577 TATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGTAATTTCTTAACAGCCGCAGTT 5636
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 5637 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGGTCCTGAAGCACAA 5696
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || || |||| ||| || ||||| || ||
Sbjct 5697 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTGCATGGC 5756
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| || | ||||| ||||||||| | || || |||||||| || || ||| | | |
Sbjct 5757 GCTTTTGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCTCGATCTGTTCAAT-T 5815
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| || || |||||||| || |||||||||||||| || |||||
Sbjct 5816 GCGACCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGTTTTTGTTTCTGTATTCCT 5875
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| || ||||| ||||||| || || || ||||| || ||||| ||
Sbjct 5876 GATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTAT 5935
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||||||||| | | || |||||||||| || || ||||| || ||||| || |||||
Sbjct 5936 ATTTAGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCTGAACCCATTTCATAT 5995
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| ||||| ||| | ||||| | || ||||||| ||||||||||| | || ||
Sbjct 5996 GATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACTGT 6055
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| ||| || ||| | | ||
Sbjct 6056 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGCTTTTAACCCAAC 6115
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| || ||||| ||||||||||| |||||||| ||||| || ||||| ||
Sbjct 6116 TCAAGCGGAAGAAACCTATTCCATGGTCACTGCGAACCGCTTTTGGTCCCAAATCTTTGG 6175
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 6176 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 6235
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||| | || || ||||| ||||| ||||| ||
Sbjct 6236 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTACGTGCCTACGACTT 6295
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| |||||| || | ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 6296 CGTTTCTCAGGAAATTCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 6355
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| ||||| || ||||| | || |||||| |||| || ||||| || ||||||||
Sbjct 6356 TATTCTATTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 6415
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 6416 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 6462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563170717417240
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