Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq2 569 6e-158
>seq2
Length=21306
Score = 569 bits (630), Expect = 6e-158
Identities = 728/995 (73%), Gaps = 6/995 (1%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | ||| || | ||||||||||| | || ||||||
Sbjct 19968 TGGGGTCGCTTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTT 20027
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397
||||| ||||||| |||| || | | | || || | ||| |||||| | || ||||
Sbjct 20028 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTGTTTATTATTGCCTTCA 20085
Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457
|||| || ||||| ||||| |||||||| |||||||||||||| ||||| ||||| || |
Sbjct 20086 TTGCCGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTT 20145
Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517
| || ||||| || ||||| |||||| | | |||| | || || || | || |
Sbjct 20146 ACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACT 20205
Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577
| ||| | || |||||||| || |||| |||||| | |||||||| || ||||||
Sbjct 20206 TTTATCCAATTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 20265
Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637
| || | || | |||||| | | ||| | | |||| |||| || || ||||| |
Sbjct 20266 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGC 20325
Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697
|| | ||| || || ||| | || ||||| |||||| || || || ||||| || |
Sbjct 20326 TTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 20385
Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757
| || || || || ||| | |||| ||| |||| ||||| |||||| ||||| ||||
Sbjct 20386 CTGCTACCGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGC 20445
Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817
|||| || ||||| ||||| |||||||||||| | || ||||||||||| || ||||| |
Sbjct 20446 CTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCC 20505
Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877
|||||||||| || || ||| | || || || || ||||| || || || | ||| |
Sbjct 20506 TTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTG 20565
Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937
||||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 20566 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 20625
Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997
||| | || |||| |||||||||||||| || |||||||| || || || || ||||
Sbjct 20626 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATG 20685
Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056
|||| ||||| || | |||||||||||||| | |||| || || || || || |||
Sbjct 20686 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCGCGTTCGTTACAC 20744
Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116
||||| || || |||||||| || ||||| || ||||| ||| || | || ||||||||
Sbjct 20745 TTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACT 20804
Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176
||||| || ||| | |||||||| || ||||||||||| | ||||||| || | |
Sbjct 20805 ATGGCATTCAACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGT 20864
Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236
|| || |||||||||||||||| | || ||||| |||||||| | || || |||||
Sbjct 20865 GTAATTAATACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCAT 20924
Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
|| || ||||| ||||||||||| || ||||| ||
Sbjct 20925 GAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 20959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143523386311604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |