Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq2 482 7e-132 >seq2 Length=21306 Score = 482 bits (534), Expect = 7e-132 Identities = 699/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || ||||||||||||||||| || ||||||||||| | || |||||| Sbjct 20959 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 20900 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | ||||||||| ||| |||| || | ||| ||||| || Sbjct 20899 GCACGGTTGATAATATCAGCCCAAGTATTAATTACACGGCCTTGGCTATCAACTACAGAT 20840 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 |||||||| || |||||||||||||| |||||||| || | |||||| | || || | | Sbjct 20839 TGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCTAAAGCAGTAAAC 20780 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || ||||| || | ||||| ||| || ||| Sbjct 20779 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGCGAGTTGTTGAAA 20720 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || || |||||||| || Sbjct 20719 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 20660 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || | || || | ||| || | | ||||| ||||| Sbjct 20659 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 20600 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | ||||| ||||| || ||||||||| ||| || | || ||||| || Sbjct 20599 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 20540 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| || || ||| || ||||| ||||| || || || || || || |||||||| Sbjct 20539 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCCTGGAATACA 20480 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||| ||||| ||||||||||| || || |||||||| |||||| |||||| ||||| Sbjct 20479 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 20420 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 || | || || | ||||| || ||| ||| || | | || |||| |||||||||| Sbjct 20419 CCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 20360 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 ||||| |||| ||| || || | | || || ||||||| | || || Sbjct 20359 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCCATGTAACAA 20300 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| |||| ||| || || |||||||||| ||| Sbjct 20299 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 20240 Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656 || || | | | |||||||| || || ||||| || | ||||| || ||| | Sbjct 20239 TCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATAGCTGCAGAAGTA 20180 Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716 || | | || ||||| || |||||||||||||| | || || || ||||| || ||| Sbjct 20179 GGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCA 20120 Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGT 26775 || || ||||| |||||||| || || || || |||||||||| ||||| ||| | ||| Sbjct 20119 CGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATAAACACA-GAAGT 20061 Query 26776 GGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTC 26835 || | | |||| || ||||| | || || |||||||| | || |||||||| || Sbjct 20060 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 20001 Query 26836 AGTACTTGTAACCCACTCACAAAA 26859 ||||| || | ||| | ||| || Sbjct 20000 GGTACTAGTTATCCAGTTACAGAA 19977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147702312216160