Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq2 610 8e-170
>seq2
Length=21306
Score = 610 bits (676), Expect = 8e-170
Identities = 708/953 (74%), Gaps = 6/953 (1%)
Strand=Plus/Minus
Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412
||| ||||||| || || ||||||||||| ||||| ||||| || ||||||||||||||
Sbjct 20968 TCAACAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 20909
Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG--- 67469
||||| || | ||| | || || ||||||||| ||| || || ||| |
Sbjct 20908 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTAC---ACGGCCTTGGCTA 20852
Query 67470 TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCC 67529
||||| || |||||||| || |||||||| || ||||||||||||||||| | |||
Sbjct 20851 TCAACTACAGATTGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCT 20792
Query 67530 ATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTT 67589
| ||||| |||||||| | || ||||| | ||||| ||||||||||| | |
Sbjct 20791 AAAGCAGTAAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGC 20732
Query 67590 GAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACA 67649
|||||||||||| ||||| ||||||||||| || || || || |||||||| || ||
Sbjct 20731 GAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACG 20672
Query 67650 ATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCA 67709
|| || ||||| ||||| ||||| ||||| ||||||| | || || || | ||
Sbjct 20671 ATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCT 20612
Query 67710 GTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAA 67769
|| ||||| ||||| | | |||||| || | ||||| ||||||||||| || || |||
Sbjct 20611 GTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAA 20552
Query 67770 CCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCT 67829
|| ||||||||||| ||||| || | ||| || ||||| ||||||||||||||||||||
Sbjct 20551 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCA 20492
Query 67830 GCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAG 67889
|| ||||| || | |||| |||| |||||||||||||| || |||||||| | |||||
Sbjct 20491 GCCTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAA 20432
Query 67890 AAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCA 67949
||| |||||||| | || |||| |||||| |||||| || || | || |||||
Sbjct 20431 AAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCT 20372
Query 67950 GAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGA 68009
|| ||||| ||| |||||||| |||||||| |||||| || ||| ||||||| ||||
Sbjct 20371 GAATATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGA 20312
Query 68010 CCACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCA 68069
|| ||| | | || | | |||||| | || | |||| |||| ||||||
Sbjct 20311 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCA 20252
Query 68070 TTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATT 68129
|| || ||||| ||||| | | |||||||||||| || ||||| ||||| | ||||||
Sbjct 20251 TTGTATAACCATTCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATA 20192
Query 68130 GCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCT 68189
|| ||| |||||| || ||||| || || || ||||| ||||| | || || ||
Sbjct 20191 GCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCA 20132
Query 68190 GCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATG 68249
| ||||||||| | |||||||| ||||| |||||||| || |||||||| ||||| ||
Sbjct 20131 GAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATA 20072
Query 68250 AAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302
|| || | ||| | | ||| ||| |||||||| ||||| ||||| ||
Sbjct 20071 AACACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCC 20019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566908059382680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |