Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq2 610 8e-170 >seq2 Length=21306 Score = 610 bits (676), Expect = 8e-170 Identities = 708/953 (74%), Gaps = 6/953 (1%) Strand=Plus/Minus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| ||||||| || || ||||||||||| ||||| ||||| || |||||||||||||| Sbjct 20968 TCAACAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 20909 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG--- 67469 ||||| || | ||| | || || ||||||||| ||| || || ||| | Sbjct 20908 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTAC---ACGGCCTTGGCTA 20852 Query 67470 TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCC 67529 ||||| || |||||||| || |||||||| || ||||||||||||||||| | ||| Sbjct 20851 TCAACTACAGATTGGTTAAAATTGAAACCATTTAGGTTGAATGCCATAGTACTGATACCT 20792 Query 67530 ATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTT 67589 | ||||| |||||||| | || ||||| | ||||| ||||||||||| | | Sbjct 20791 AAAGCAGTAAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGC 20732 Query 67590 GAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACA 67649 |||||||||||| ||||| ||||||||||| || || || || |||||||| || || Sbjct 20731 GAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACG 20672 Query 67650 ATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCA 67709 || || ||||| ||||| ||||| ||||| ||||||| | || || || | || Sbjct 20671 ATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCT 20612 Query 67710 GTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAA 67769 || ||||| ||||| | | |||||| || | ||||| ||||||||||| || || ||| Sbjct 20611 GTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAA 20552 Query 67770 CCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCT 67829 || ||||||||||| ||||| || | ||| || ||||| |||||||||||||||||||| Sbjct 20551 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCA 20492 Query 67830 GCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAG 67889 || ||||| || | |||| |||| |||||||||||||| || |||||||| | ||||| Sbjct 20491 GCCTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAA 20432 Query 67890 AAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCA 67949 ||| |||||||| | || |||| |||||| |||||| || || | || ||||| Sbjct 20431 AAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCT 20372 Query 67950 GAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGA 68009 || ||||| ||| |||||||| |||||||| |||||| || ||| ||||||| |||| Sbjct 20371 GAATATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGA 20312 Query 68010 CCACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCA 68069 || ||| | | || | | |||||| | || | |||| |||| |||||| Sbjct 20311 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCA 20252 Query 68070 TTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATT 68129 || || ||||| ||||| | | |||||||||||| || ||||| ||||| | |||||| Sbjct 20251 TTGTATAACCATTCATCAACGGATGCTGCTTCCCAAATTGGATAAAAGTGCAAACCGATA 20192 Query 68130 GCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCT 68189 || ||| |||||| || ||||| || || || ||||| ||||| | || || || Sbjct 20191 GCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCA 20132 Query 68190 GCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATG 68249 | ||||||||| | |||||||| ||||| |||||||| || |||||||| ||||| || Sbjct 20131 GAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCGGCAATGAAGGCAATAATA 20072 Query 68250 AAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 || || | ||| | | ||| ||| |||||||| ||||| ||||| || Sbjct 20071 AACACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCC 20019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566908059382680