Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04]
5,523 sequences; 3,663,524 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq2 672 0.0
seq1 621 4e-173
>seq2
Length=21306
Score = 672 bits (744), Expect = 0.0
Identities = 747/994 (75%), Gaps = 2/994 (0%)
Strand=Plus/Plus
Query 150838 CTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCT 150897
||| ||| ||||| | || ||| | |||||||| || |||| ||||| ||||| |
Sbjct 19976 CTTCTGTAACTGGATAACTAGTACCGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTT 20035
Query 150898 GATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCC 150957
|||||| || || | ||| | ||||| | || || | || ||||| || |||||
Sbjct 20036 GATGATCCCTACCTTATTGACCGCAACTTCTGTGTTTATTATTGCCTTCATTGCCGCTCC 20095
Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017
|| || || || ||||| || |||||||| ||| |||| ||||| | ||||| |||||
Sbjct 20096 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 20155
Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077
|| ||||| ||||| || ||||| ||||| ||||||||| ||||||| ||||| ||
Sbjct 20156 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCAAT 20215
Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 151137
||||||||||| || | ||||||||| | ||||| |||||||||| |||| ||||
Sbjct 20216 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 20275
Query 151138 CTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCG 151197
| |||||| | ||||| | | ||||||||||||||||||||| || || |||
Sbjct 20276 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 20335
Query 151198 CTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTG 151256
|||||||||| || ||||| ||| |||||||| || ||||| ||||| ||||| | |
Sbjct 20336 TCTGGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 20394
Query 151257 CAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTA 151316
| || ||| | |||| || | |||||||| ||| ||||||| ||||| || || |
Sbjct 20395 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 20454
Query 151317 TTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACC 151376
||||||| || ||||||| |||| |||| ||||| || ||||||||||| || ||||| |
Sbjct 20455 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATC 20514
Query 151377 CCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACG 151436
| || || ||| | || || |||||||| ||||| || || || ||| || ||||| |
Sbjct 20515 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 20574
Query 151437 GTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATG 151496
|||| |||| |||||| || | | || ||||| ||||| || || || | |
Sbjct 20575 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 20634
Query 151497 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTG 151556
|||||| ||||||||||| ||||| || || || ||||| ||||| || ||||| ||||
Sbjct 20635 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 20694
Query 151557 GTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 151616
| || | ||||||||||| ||| |||||||| || |||||| | ||||||||||| |
Sbjct 20695 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCGCGTTCGTTACACTTCTTCCTAG 20754
Query 151617 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCA 151676
| || |||||||| || ||||||||||| ||||| | ||| |||| || ||||||||||
Sbjct 20755 CTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATCAGTACTATGGCATTCA 20814
Query 151677 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 151736
|||| || |||||||| || ||||| || | | ||| | || ||| || | || |
Sbjct 20815 ACCTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGCCAAGGCCGTGTAATTAATA 20874
Query 151737 CCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 151796
| ||||| || || | |||||||| || ||||||||||||||||| || |||||||
Sbjct 20875 CTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 20934
Query 151797 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 151830
|||| ||||||||||| || || ||||||| |||
Sbjct 20935 CTCATAACTTCCCTCTAGATCTAGCTGCTGTTGA 20968
>seq1
Length=29327
Score = 621 bits (688), Expect = 4e-173
Identities = 750/1015 (74%), Gaps = 4/1015 (0%)
Strand=Plus/Plus
Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGA 152418
|||||| | ||||||||||| | ||| ||||||||||||||||| |||||||| ||
Sbjct 5445 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 5504
Query 152419 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 152478
|| | || ||||| ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 5505 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 5564
Query 152479 GCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538
| || |||||||| || |||||||| ||||||||| |||| ||| || ||||||
Sbjct 5565 GTAACTTCATGGTATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGTAA-TTTCTT 5623
Query 152539 A-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGG 152597
| | || |||||||||||||| || || | | | |||||| | || | || |||||
Sbjct 5624 AACAGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGG 5683
Query 152598 TCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGT 152657
|||||| || ||||| ||||| | ||| ||| | || || || ||| |||||||
Sbjct 5684 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 5743
Query 152658 GGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 152717
|| || || || ||||| | ||||| ||||||||| | || || ||||| || || ||
Sbjct 5744 TGCTCTGCATGGCGCTTTTGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCTCG 5803
Query 152718 -TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTG 152776
||| || | | || || || ||||| || || |||||||| || || ||||||||||
Sbjct 5804 ATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGTTTTTG 5862
Query 152777 TTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCG 152836
|| || || || || || || || || || || ||||||| || || || ||| |
Sbjct 5863 TTTCTGTATTCCTGATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTTTG 5922
Query 152837 GGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGA 152896
| || ||||| || || ||||| | ||||| |||||||||| || || ||||| |||
Sbjct 5923 GTGTAGCAGCTATATTTAGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCTGA 5982
Query 152897 ATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTC 152956
| || |||||||||||||| ||||| ||| | ||||| | || ||||| | || ||||
Sbjct 5983 ACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTC 6042
Query 152957 ATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAG 153016
|||||| ||| ||||| |||||||| | | |||||||||| ||||| || || |
Sbjct 6043 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTG 6102
Query 153017 CTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGT 153076
|||| || ||||||| ||||| |||||||| ||||| ||||| ||||| || ||||
Sbjct 6103 CTTTTAACCCAACTCAAGCGGAAGAAACCTATTCCATGGTCACTGCGAACCGCTTTTGGT 6162
Query 153077 CCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTG 153136
|||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||
Sbjct 6163 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 6222
Query 153137 TACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTC 153196
|||| || | ||| | |||| | || ||||| | | ||| | || || || || |
Sbjct 6223 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTAC 6282
Query 153197 GTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGT 153256
|||| ||||| || || ||||| ||||| | || | |||||||||||||||||||| |
Sbjct 6283 GTGCCTACGACTTCGTTTCTCAGGAAATTCGCGCAGCGGAAGATCCTGAATTTGAGACTT 6342
Query 153257 TCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACC 153316
|||| || || ||||| || || ||||||||| |||| |||||| |||| || || |
Sbjct 6343 TCTACACCAAAAATATTCTATTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATC 6402
Query 153317 AACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371
| |||||||| ||| | | |||||||| ||||| | ||||| || ||||||||
Sbjct 6403 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 6457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549584455443560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |