Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
>seq1
Length=52205531
Score = 120 bits (132), Expect = 3e-22
Identities = 561/875 (64%), Gaps = 27/875 (3%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
|| || || | |||||| ||||| || ||||| ||||| |||| || |||||| ||||
Sbjct 45627288 TGATAGTCTCCAACGCGCTTTTCAAAGAAGTTGGTTTTCCCCTGGAGTGATATAAGCTCC 45627229
Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGT-----ACCCCAGTTCGGCGA 16790
|| ||||||| ||||| ||||| || | | | |||| || | | |
Sbjct 45627228 ATCCAATCAAAGGGATT-----CTGAACATCGTACACCTTCCCACACCCAAGCGCACCCA 45627174
Query 16791 TTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAA 16850
|| | |||||| ||||| || ||||| || | ||| | || | ||||| || | |
Sbjct 45627173 GCAACCGATCCGCAACAAACTCAATATACTGACTCATCAGCTCCCCATTCATACCCACCA 45627114
Query 16851 GA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909
| || | ||||| || || || |||| |||||| ||||||| || | |
Sbjct 45627113 AAGCGCAG-GGAAGCGCGTCGCACACAAATTCCCTCTCTATGTCAACCGCGTCGCGCACA 45627055
Query 16910 ATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCG 16969
|| || || ||||| | | | | | | || | ||| || || |||
Sbjct 45627054 ATCTCCTTCACGCGCTCCTCAGTGAGCTTCTTTCTGAGGAGAGAGTACAAGAGGCACGCG 45626995
Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATA--AGTTCGTTAGAAAATGTCAACCCGG 17027
|| ||||| || | || || |||| || |||| |||||||| || || || | ||||
Sbjct 45626994 AAGTCGCAGTGAAGCCCTTCATCTC-GC-GATATGAGTTCGTTGGAGAAGGTGAGACCGG 45626937
Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087
||||| || || ||||| | ||| ||||||| | ||| ||||| ||||| || |
Sbjct 45626936 GCATCAAACCGCGCTTCTTGAGCCAGAATATCGAGCAGAAGCTGCCAGAGAAGAAGATTC 45626877
Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147
|||||||| | || || |||| | || |||||| | | || || ||| |||
Sbjct 45626876 CCTCGACGCAGGCGAAGGCGACGATGCGCTCGGCGAAAGAGTCGGTGGCGT--CGA-TCC 45626820
Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
| | |||||| || || | | ||| || || |||| ||| || |
Sbjct 45626819 AGCGCAAGGCCCACTGTGCCTTCTTGGCGACGCAGGGGATGGTGTCTACGGCACGGAACA 45626760
Query 17208 ATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCG 17266
| | ||||| || | ||| | || || || || | ||| ||||||||||| |||
Sbjct 45626759 GGTGGTTCTTTTCG-GTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGGCTGTACATCTCG 45626701
Query 17267 GAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATCGGGCTTCCGCTATTTG 17325
||||| |||||||| ||||| ||||| || ||||| |||||| ||||| || | | |||
Sbjct 45626700 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCA-CGGGCCTCGGAGACTTG 45626642
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385
| |||| ||| || | || || |||||| ||||| |||||| ||||| ||
Sbjct 45626641 GATTTCCTTCATGAAGCGGGCGGCGAGGTTTTCGAGAACGATACCGTCGGAGGCGGCAAA 45626582
Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGCGCCAGTCC 17443
|| || | | || | ||||| | ||| | ||||| || | |||||
Sbjct 45626581 GAAGGCGAGGACGTGGGTGATGAAGTGGCGCTCGCCGTCGGTG--AGGGAGTCCCAGTGG 45626524
Query 17444 TTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTA 17503
| |||| ||| | || || ||||||| |||||| ||| || | || || ||
Sbjct 45626523 CGGAGGTCTTGGGAAAGGTCAACCTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTG 45626464
Query 17504 TACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
||||| | ||| || | |||||| || |||||
Sbjct 45626463 TACATTTCCCATATTTGGGGGTATTGGATTGGGAA 45626429
Score = 105 bits (116), Expect = 7e-18
Identities = 286/433 (66%), Gaps = 5/433 (1%)
Strand=Plus/Plus
Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019
||| || ||||| ||||| || | |||||||| | | ||| |||||||| || || ||
Sbjct 19482584 CAGGCACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGT 19482643
Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079
| || ||||| ||||| ||||| | ||| || || | | || || || ||
Sbjct 19482644 AAGTCCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAA 19482703
Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139
||| || ||||||||| | || || || | | || |||||| | | | || | ||
Sbjct 19482704 GAAGATTCCCTCGACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGT- 19482762
Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199
||| |||| | |||| | || || | | | ||| || || || |||||
Sbjct 19482763 -CGA-TCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGC 19482820
Query 17200 CTTAAATA-ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258
| || | | |||| | || || || |||| || || || | ||| |||||||
Sbjct 19482821 GTGGAAGAGACGGGTCTTCTCTTTGGAG-TCTTTTATGTAGGTTTCAAGGAGGAGGCTGT 19482879
Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318
|||| |||||||| |||||||| ||||| |||||||| ||||| ||| ||||| || |
Sbjct 19482880 ACATCTCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCCTCGG 19482939
Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378
| || || ||| ||| || | || || ||||| |||||||| ||| |
Sbjct 19482940 AGACCTGGACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCCATCGGAGG 19482999
Query 17379 CGGCGAAAAACGC 17391
||||||| || ||
Sbjct 19483000 CGGCGAAGAAGGC 19483012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517541019721440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |