Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
>seq3
Length=52284309
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||||||||| | || || |||| || || ||||||||| || |||| | |
Sbjct 30378863 AATGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTC 30378922
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | | || | || ||| ||| || || ||||| | || ||||||
Sbjct 30378923 TGATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30378982
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||| || ||||||||||| || || || |||||||| || | || ||||| ||
Sbjct 30378983 ACAGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30379042
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||| || |||||||| ||||||||| ||||||| ||| | || || ||
Sbjct 30379043 TATCCAGAAGGAATCCACTCTTCACTTGGTGTTGCGACTTCGTGGTGG 30379090
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 25028 TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGA 25087
|||| | ||||| || || | ||||| ||||| |||||||| || ||| ||| |||
Sbjct 30377945 TGTACAGATGCAGATCTTTGTGAAAACTTTGACAGGCAAAACTATCACCCTCGAGGTGGA 30378004
Query 25088 ACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGT 25147
| || | || || | | || ||||| || || || ||||||||| | ||
Sbjct 30378005 ATCCTCTGACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCC 30378064
Query 25148 AGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGA 25207
||||| || || || || || || || || ||| | || ||| ||| | |||||
Sbjct 30378065 GGATCAGCAGAGGCTGATTTTCGCTGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGA 30378124
Query 25208 TTACAATATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||||||| ||||||||||| ||||| ||| | |||
Sbjct 30378125 TTACAATATCCAAAAGGAATCCACTCTCCACCTCGTG 30378161
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| ||||| | || || |||| || |||||||||||| || ||| | |
Sbjct 30284683 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30284742
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||| ||| || |||||||| | || ||||||
Sbjct 30284743 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATCA 30284802
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|| || ||||| ||||| || ||||||||||||||| || |||| || |||||
Sbjct 30284803 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30284862
Query 25214 TATTCAAAAGGAATCTACTCTTCAC 25238
|||||| |||||||| || || |||
Sbjct 30284863 TATTCAGAAGGAATCCACCCTCCAC 30284887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410793255337112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |