Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 2e-14 seq5 89.7 8e-13 >seq3 Length=52284309 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| ||||| || || ||||| || | || ||||| | ||||||||||| | | Sbjct 30274583 CCACCCCTAAGCCTCAAAACCAAGTGCAGGGTGGATTCCATCTGAATATTATAATCGGCA 30274524 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | ||| || | ||||| |||||||| |||| || |||||||||||||| Sbjct 30274523 AGGGTTCTTCCATCCTCAAGCTGTTTACCAGCAAATATCAGCCTCTGCTGATCCGGAGGG 30274464 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 30274463 ATGCCCTCCTTGTCTTG 30274447 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||||||||||| ||| ||||| | ||| || | |||||| ||||||||||||| || Sbjct 30309740 ATATTATAATCTGCAAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTC 30309681 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||||||||| || || ||||| || || Sbjct 30309680 TGCTGATCCGGAGGGATACCCTCTTTGTCCTG 30309649 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| || || ||||| || | |||||||||||| ||||||||||| | Sbjct 30284456 TTCCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCG 30284397 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||| ||||| | ||| || | ||||| || ||||| || | || ||||| || || | Sbjct 30284396 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 30284337 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| || || ||||| || Sbjct 30284336 GAATACCCTCCTTATCCTG 30284318 Score = 89.7 bits (98), Expect = 8e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||||||||| | ||| ||||| | ||| || | |||||| ||||||||||||| || Sbjct 30274310 ATATTATAATCGGCAAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTC 30274251 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| ||||| || || ||||| ||||| Sbjct 30274250 TGCTGATCTGGAGGGATACCCTCTTTGTCTTG 30274219 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| || || ||||| || | ||| ||||| || || |||||||| | | Sbjct 30274811 CCACCCCGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCGCA 30274752 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | || || | ||||| ||||||||||| | || |||||||||||||| Sbjct 30274751 AGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGG 30274692 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 30274691 ATGCCCTCCTTGTCTTG 30274675 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| || || ||||| || | ||| ||||| || || |||||||| | | Sbjct 30310013 CCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCGCA 30309954 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | || || | ||||| ||||||||||| | || |||||||||||||| Sbjct 30309953 AGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGG 30309894 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 30309893 ATGCCCTCCTTGTCTTG 30309877 >seq5 Length=40819286 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || || || || || ||||| || | || ||||| || ||| |||||||| Sbjct 8292503 GTTCCTCCCCTGAGCCTCAAAACCAAGTGAAGGGTTGATTCCTTTTGTATGTTATAATCA 8292562 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||| || | | ||| || | ||| || |||||||||||||| || |||||||| ||| Sbjct 8292563 GCAAGTGTGCGACCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 8292622 Query 146168 GGAATTCCTTCTTTATC 146184 || || ||||| || || Sbjct 8292623 GGGATACCTTCCTTGTC 8292639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743519819791360