Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 3e-14 seq9 86.0 1e-11 >seq2 Length=49040938 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||||||| ||||||| || || ||| | || || Sbjct 43315334 GACTTTGAATATGATTACTTTGGTTTCAAAACCCTGGAGAGGTCTTACCTCTTAAAGGTT 43315275 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| | ||||| || || |||||||||||| | || ||||| |||||||| Sbjct 43315274 CAAGGAAAGGTTGTGGAGAGACCACAACACATGTTGATGAGGGTTGCTGTTGGGATTCAT 43315215 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 || |||||||| || | || |||| ||| ||| | |||| ||| | || Sbjct 43315214 AAAGATGACATTGACTCTGCTGTCCAGACTTACCATTTGATGTCTCAACGATGGTTCACT 43315155 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 ||||| | || || || ||||| || || || Sbjct 43315154 CATGCATCTCCAACTCTTTTCAATGCAGGAAC 43315123 >seq9 Length=37469608 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842 ||||| ||| ||| || | || || || || || |||| |||| |||||||| | Sbjct 17262329 TGGACAGCGAGATAATTTATGACAGGGACTTTGACTATGATTATTTTGGGTTCAAAACCC 17262388 Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 | |||| || || ||| | || || | || || | || ||| | || ||||||| Sbjct 17262389 TCGAGAGGTCTTACCTCTTGAAGGTTCAAGGGCAGGTTGTTGAAAGGCCCCAACACATGT 17262448 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA 248942 ||||| |||| || || ||||||||||||||||||||||| Sbjct 17262449 TGATGAGAGTCGCGGTTGGGATTCACAAGGATGACATAGA 17262488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073756659596544