Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 9e-15 >seq3 Length=52284309 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || |||||||| |||||||||||||| ||| Sbjct 30310469 CCACCACGAAGGCGAAGGACAAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCC 30310410 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||||||||| || ||| | ||||| || || ||||| || Sbjct 30310409 AAGGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 30310350 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || ||| | |||| || || | ||| || ||| | ||| Sbjct 30310349 ATGCCCTCCTTGTCCTGAATCT-TTGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 30310291 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | || || |||| || || ||||| || |||||| Sbjct 30310290 CTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 30310242 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || ||||| || |||||||||||||| ||| Sbjct 30315208 CCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 30315149 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||||||||| || ||| | ||||| || || ||||| || Sbjct 30315148 AAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGG 30315089 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || ||| | |||| || || | ||| || ||| | ||| Sbjct 30315088 ATGCCCTCCTTGTCCTGAATCT-TTGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 30315030 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| |||| || |||| || || ||||| || |||||| Sbjct 30315029 CTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 30314981 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || ||||| || |||||||||||||| ||| Sbjct 30275266 CCACCACGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 30275207 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||||||||| || ||| | ||||| || || ||||| || Sbjct 30275206 AAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 30275147 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || ||| | |||| || || | ||| || ||| | ||| Sbjct 30275146 ATGCCCTCCTTGTCTTGAATCT-TTGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 30275088 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | || || |||| || || ||||| || |||||| Sbjct 30275087 CTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 30275039 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | ||| || || ||||| || ||||| |||||||| ||| Sbjct 30284910 CCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCTGCC 30284851 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||||||||| || ||| | ||||| || || ||||| || Sbjct 30284850 AAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGG 30284791 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||| || || ||| | |||| || || | ||| || ||| | ||| Sbjct 30284790 ATGCCTTCTTTGTCCTGAATCT-TTGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 30284732 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| |||| || |||| || || ||||| || |||||| Sbjct 30284731 CTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 30284683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379340726735460