Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 163 4e-35 seq2 95.1 2e-14 seq9 91.5 2e-13 >seq1 Length=52205531 Score = 163 bits (180), Expect = 4e-35 Identities = 387/579 (67%), Gaps = 8/579 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| |||||||| || |||||||| | || ||||||||||| || || ||| Sbjct 19482588 CACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGT 19482647 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACCCAGAAAAGAA 50078 || ||||| ||||| ||||| || ||||| || || || ||||| | || || ||||| Sbjct 19482648 CCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAGA-GCAAAAGCTTCCGGAGAAGAA 19482706 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACT-GGCGCTGTCATG 50135 |||||| || || ||| |||||||| | | ||| | | ||| |||| ||| Sbjct 19482707 GATTCCCTCGACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGTC--- 19482763 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | | ||||| | |||||||| | || || || || || || ||||| | Sbjct 19482764 GATCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGTG 19482823 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 |||||| | | || || || ||||| | || || || | | || || ||||| Sbjct 19482824 GAAGAGACGGGTCTTCTCTTTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCTGTACAT 19482883 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || |||||||| || ||||| |||||||| |||||||| | ||||||| | Sbjct 19482884 CTCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCCTCGGAGAC 19482943 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| || || | || || | || | |||||| || || || || ||| || Sbjct 19482944 CTGGACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCCATCGGAGGCGGC 19483003 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATC 50435 || || || | || || | || ||||| ||| ||||| | | ||||| Sbjct 19483004 GAAGAAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAGAGTCTCCCAATG 19483063 Query 50436 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495 ||| || | || | || || || ||| | ||||| || || || || || || || Sbjct 19483064 CCGGATGTCCTGCGAGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCAGCTTTCTT 19483123 Query 50496 ATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 ||||| | |||||| | | |||||||||||||| || Sbjct 19483124 GTACATTTCCCAGATTTGGGGGTATTGGATTGGGAACAT 19483162 Score = 127 bits (140), Expect = 3e-24 Identities = 397/612 (65%), Gaps = 2/612 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| |||||||| || || || |||| || ||||||||||| || ||||| Sbjct 45627000 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGA 45626941 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAA 50078 |||||||| | || ||||| || ||||| ||||| || ||| | | ||||| ||||| Sbjct 45626940 CCGGGCATCAAACCGCGCTTCTTGAGCCAGAATATCGA-GCAGAAGCTGCCAGAGAAGAA 45626882 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTAT 50138 |||||| || || ||| ||||| || | | ||| | || | || || | | || Sbjct 45626881 GATTCCCTCGACGCAGGCGAAGGCGACGATGCGCTCGGCGAAAGAGTCGGTGGCGTCGAT 45626822 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| ||||| | |||||||| || || || || || |||| |||| || Sbjct 45626821 CCAGCGCAAGGCCCACTGTGCCTTCTTGGCGACGCAGGGGATGGTGTCTACGGCACGGAA 45626762 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 || | ||| ||||| | ||||| | || || || | | || || ||||| || Sbjct 45626761 CAGGTGGTTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGGCTGTACATCTC 45626702 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 50318 || || ||||| || ||||| ||||| || ||||||||| | ||||||| | || Sbjct 45626701 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGGGCCTCGGAGACTTG 45626642 Query 50319 CACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 50378 | ||| | || || | || | ||||| || || ||||| ||| ||||| Sbjct 45626641 GATTTCCTTCATGAAGCGGGCGGCGAGGTTTTCGAGAACGATACCGTCGGAGGCGGCAAA 45626582 Query 50379 AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 || || | || || | || || || ||| | || || | ||| | Sbjct 45626581 GAAGGCGAGGACGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCG 45626522 Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 || |||| || | || || ||||| | ||||| || || || || || || || || Sbjct 45626521 GAGGTCTTGGGAAAGGTCAACCTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTA 45626462 Query 50499 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGC 50558 ||| | ||| || | | |||||||||||||| || || | | ||| || || || Sbjct 45626461 CATTTCCCATATTTGGGGGTATTGGATTGGGAACATGCAGAAGCGGTCTGGGTTCGGGGC 45626402 Query 50559 AAGGATCGGTTC 50570 |||| ||||| Sbjct 45626401 CAGGAGTGGTTC 45626390 >seq2 Length=49040938 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 ||| || ||||| | || | ||| || | ||| | || | || |||||||| |||||| Sbjct 43314766 TCCCCCTTGATCAACATAACGAGCAGTATCATTGAACACACGCAGCATTGGAACAATACC 43314825 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||| ||||| ||||| || || ||| || || || ||||||||||||| || || Sbjct 43314826 ATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 43314885 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | ||| ||||| || || ||| || | || || ||| || || ||||| || Sbjct 43314886 AACACCAATTCCTCCAGCTGATTTGCTAATGATAGCACACTCTTTCAAAGTGTCATATAT 43314945 Query 80274 GCCCTCTATGCTATCATCAATCATG 80298 |||||||| |||||||| ||||| Sbjct 43314946 TCCCTCTATACTATCATCTTTCATG 43314970 >seq9 Length=37469608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 ||| |||||||| | || | || || | ||| | || | |||||||||| |||||| Sbjct 17262934 TCCCCCCTGATCAACATAGCGGGCAGTATCATTGAACACACGTAACATTGGAACAATACC 17262875 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||||| || ||||| ||||| ||||| || || | |||||||| || | || Sbjct 17262874 GTTGGACGTCCCATTTGTCCCACGAATATAACTACCCGTAGCACGAATGTTGTGGACAGA 17262815 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | ||||||||| || || ||| || | || || || || || ||||| || Sbjct 17262814 GACACCTATTCCTCCAGCTGATTTGCTAATGATGGCACACTCCTTCAAAGTTTCATATAT 17262755 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 |||||||||||||||||| ||||| | || || |||||| Sbjct 17262754 CCCCTCTATGCTATCATCATTCATGCACACGAGGAAGCAGCTA 17262712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262443321120