Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=52284309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | |||||| || | ||| || || | || ||||||||||| || |||||| Sbjct 30284874 TCCTTCTGAATATTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAA 30284815 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 || | | ||| ||||| | || | |||||||| || ||| ||| |||| || | Sbjct 30284814 ATAAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTC-CTGAATCTTTGCTTTCACATT 30284756 Query 43038 GCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 ||| ||| || ||| ||| || || | || || ||||| || || ||||| |||| Sbjct 30284755 ATCAATTGTATC-AGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCA 30284697 Query 43097 CAAAAATTTGCATT 43110 |||| || |||||| Sbjct 30284696 CAAATATCTGCATT 30284683 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| |||| |||||||| | ||||||||||| | || || | || || | ||| Sbjct 30378154 TGGAGAGTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGC 30378095 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAAC 43026 || || || ||||||| | ||| ||||| | || | ||||||||| || |||| Sbjct 30378094 TTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTA 30378035 Query 43027 TCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTT 43086 | ||||| | ||| ||||| | || || || | || |||||||| || || Sbjct 30378034 GCCTTGACATTATCAATGGTGTCAGAGGATTCCACCTCGAGGGTGATAGTTTTGCCTGTC 30377975 Query 43087 AGAGTTTTCACAAAAATTTGCAT 43109 | |||||||||||| || ||||| Sbjct 30377974 AAAGTTTTCACAAAGATCTGCAT 30377952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381366309257064