Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 6e-33
>seq1
Length=52205531
Score = 156 bits (172), Expect = 6e-33
Identities = 380/560 (68%), Gaps = 18/560 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||||||||||||| || ||| | ||||| || ||||||| || |||||||| ||
Sbjct 19483138 ATCTGGGAAATGTACAAGAAAGCTGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTC 19483079
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| | |||||||||||| | || || ||||| | || || |
Sbjct 19483078 TCGCAGGACATCCGGCATTGGGAGACTC---TAACCGATGGCGAGCGCCATTTCATCACC 19483022
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | |||||||| |||| ||||||||| |||||| || || || | | | ||
Sbjct 19483021 CACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTTGAAAACCTTGCCGGC-CG 19482963
Query 125198 ATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAATCAT 125254
||| | ||| | ||| || | |||| || || || ||||| || || |||
Sbjct 19482962 TTTCATGAAGGAGGT--CCAGGTCTCCGAGGCC-CGCGCCTTCTACGGCTTTCAGATCGC 19482906
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314
|| |||||| | ||||| || |||||| || |||| | ||||| || |
Sbjct 19482905 CATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTTGAAACCTACATAAAAGACTC 19482846
Query 125315 GCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| | || || | ||||| |||| || ||||| | || | | || ||||
Sbjct 19482845 -CAAAGAGAAGACCCGTCTCTTCCACGCCATTGACACTATTCCCTGCGTCACCAAGAAGG 19482787
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | || |||||||| || | |||| | |||||| | | || |
Sbjct 19482786 CTAACTGGGCCCTACGCTGGATCGACTCCGCCGAGTCCTT---CGCCGAGCGCATCGTTG 19482730
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG-TTTTGCGGCCATCTTTTGGCTC 125492
| |||||| ||| ||||| |||||||| || || || |||||| | ||||| ||||||
Sbjct 19482729 CCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGAAGCTTTTGCT-CTATCTTCTGGCTC 19482671
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
|||||||| || |||||||| ||||| || | ||||| | || || || ||||||
Sbjct 19482670 AAGAAGCGAGGCCTCATGCCGGGACTTACCTTCTCCAACGAACTCATCTCCCGCGACGAG 19482611
Query 125553 GGCCTACACTGTGACTTTGC 125572
|| || ||||| ||||| ||
Sbjct 19482610 GGGCTCCACTGCGACTTCGC 19482591
Score = 123 bits (136), Expect = 4e-23
Identities = 373/562 (66%), Gaps = 22/562 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||||||||||||| || || | ||||| || ||||| | ||||||||| || ||
Sbjct 45626450 ATATGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTT 45626509
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||| | ||||| | | ||||| | | | || || ||||| | || || |
Sbjct 45626510 TCCCAAGACCTCCGCCACTGGGACTCCC---TCACCGACGGCGAGCGCCACTTCATCACC 45626566
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | ||||||||||||| |||||| || ||||| ||| || || | ||
Sbjct 45626567 CACGTCCTCGCCTTCTTTGCCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGC 45626626
Query 125199 TTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256
||| | || | | | || | |||| |||||||| ||||| ||||| ||| |
Sbjct 45626627 TTCATGAAGGAAATC-CAAGTCTCCGAGGCC-CGTGCTTTCTACGGCTTCCAGATCGCCA 45626684
Query 125257 TTGAGAACGTGCACTCGGAAATGTACT--CTACACTGATTGACATGTACATTCGCGA-TC 125313
| |||||| | ||||| || |||||| || | || | || | ||||| || ||
Sbjct 45626685 TCGAGAACATCCACTCCGAGATGTACAGCCTCCTCT--TGGAAACCTACATCAAAGACTC 45626742
Query 125314 CGC--AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371
| | || || ||| || || | || | ||||| | || | | || ||
Sbjct 45626743 CACCGAAAAGAACCACCTGTTCCGTGCCGTA---GACACCATCCCCTGCGTCGCCAAGAA 45626799
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
||| || |||| | || |||||||| | | | | |||| |||||| | | ||
Sbjct 45626800 GGCACAGTGGGCCTTGCGCTGGATCGACGCCACCGACTCTTT---CGCCGAGCGCATCGT 45626856
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGC 125490
|| |||||| ||| ||||| |||||||| || || || || ||| | || || ||||
Sbjct 45626857 CGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGCAGCTTCTGCT-CGATATTCTGGC 45626915
Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550
||||||||||||| | |||||||| || || | ||||| | ||||| ||||| |
Sbjct 45626916 TCAAGAAGCGCGGTTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATATCGCGAGATG 45626975
Query 125551 AGGGCCTACACTGTGACTTTGC 125572
| || || ||||| ||||| ||
Sbjct 45626976 AAGGGCTTCACTGCGACTTCGC 45626997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741052641626080
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