Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
seq7 82.4 6e-11
seq2 82.4 6e-11
>seq3
Length=52284309
Score = 116 bits (128), Expect = 3e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208
|| || || |||||||| ||||| || || || ||||| ||||| || | | | |
Sbjct 30378850 CTCAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCA 30378791
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| | || || ||||| | || | | ||| ||||| |||||| || ||||||
Sbjct 30378790 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATCCCCTCTTTG 30378731
Query 15269 TCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| || ||||| ||||||| | || ||||||||| | |||| || || || |||||
Sbjct 30378730 TCCTGTATCTTTGC-CTTTACATTATCAATGGTATCGGAACTTTCAACCTCCAAAGTAAT 30378672
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||||| || |||| || || ||||||||||||||
Sbjct 30378671 GGTTTTTCCCGTCAAGGTCTTGACAAAAATTTGCAT 30378636
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| | | || |||||||| || | ||||| || || || || || |||||
Sbjct 30378636 TGCCACCACGAAGCCTCAAAACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCCG 30378577
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
|| |||| | ||||| | ||||| ||||| | || | | || ||||| |
Sbjct 30378576 CCAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGGG 30378517
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| || || ||||| ||| ||| || ||| | || |||||||| | | || |
Sbjct 30378516 GAATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCA 30378457
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || |||||||||||||| || |||| ||| || ||||| ||||||||
Sbjct 30378456 CCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 30378408
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219
|| |||||||| || || || || ||||| || || || | | | ||||| |||||
Sbjct 30284886 TGGAGGGTGGATTCCTTCTGAATATTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30284828
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
||| ||||| | || | | || || || ||| || ||||||||||| ||| ||
Sbjct 30284827 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTT 30284768
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
|||| || ||| | || || ||||| | || || || |||||||||||||| ||||
Sbjct 30284767 TGCT-TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTG 30284709
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
||||||| || ||||| || |||||
Sbjct 30284708 TCAGAGTCTTCACAAATATCTGCAT 30284684
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219
|| |||||||| ||||| || |||||||| || || || | | | ||||| |||||
Sbjct 30310445 TGGAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30310387
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
||| ||||| | || | | || || || |||||| || || ||||| ||| ||
Sbjct 30310386 TTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTT 30310327
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
|||| || ||| | || || ||||| | || || || ||||||||||| || ||||
Sbjct 30310326 TGCT-TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTG 30310268
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
||||||| || ||||| || |||||
Sbjct 30310267 TCAGAGTCTTCACAAATATCTGCAT 30310243
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| | | || ||||| || || || ||||| || || || ||||| |||||
Sbjct 30274813 TGCCACCCCGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCG 30274754
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
|| |||| ||||||| | ||||| ||||| | || | | || || || |
Sbjct 30274753 CAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAG 30274694
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
| || || || ||||| ||| ||| ||| ||| | || |||||||| | | || |
Sbjct 30274693 GGATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCA 30274634
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || ||||| ||||| || || || | ||| || ||||||||||||||
Sbjct 30274633 CCTCCAAGGTTATGGTCTTTCCAGTTAAAGTCTTCACAAAAATTTGCAT 30274585
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || ||||| || || || ||||| ||||| || | | | | ||||| | ||
Sbjct 30284658 TGCAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGC 30284599
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279
|| ||||| | || | | ||||| || ||| || ||||| ||||| ||| |||
Sbjct 30284598 TTCCCAGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCCTGAATCTTT 30284539
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
|| ||| ||| | || ||||| || | |||| || || || |||||||| || |||||
Sbjct 30284538 GC-CTTCACATTATCGATGGTGTCAGAACTTTCAACCTCCAAAGTAATGGTCTTTCCTGT 30284480
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| || |||||||||||||||||
Sbjct 30284479 CAACGTCTTTACAAAAATTTGCAT 30284456
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219
|| |||||||| || || || |||||||| || || || | | | ||||| |||||
Sbjct 30275242 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30275184
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
||| ||||| | || | | || || || |||||| || || ||||| ||| ||
Sbjct 30275183 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTT 30275124
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
|||| || ||| | || || ||||| | || || || ||||||||||| || ||||
Sbjct 30275123 TGCT-TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTG 30275065
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
||||||| || ||||| || |||||
Sbjct 30275064 TCAGAGTCTTCACAAATATCTGCAT 30275040
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219
|| |||||||| || || || |||||||| || || || | | | ||||| |||||
Sbjct 30315184 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30315126
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
||| ||||| | || | | || || || ||| || || || ||||| ||| ||
Sbjct 30315125 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTT 30315066
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
|||| || ||| | || || ||||| | || || || |||||||||||||| ||||
Sbjct 30315065 TGCT-TTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTG 30315007
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
||||||| || ||||| || |||||
Sbjct 30315006 TCAGAGTCTTCACAAATATCTGCAT 30314982
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || || ||||| ||||| || || || || || ||||| || | | | | |||
Sbjct 30379075 AACACCAAGTGAAGAGTGGATTCCTTCTGGATATTATAATCAGCAAGGGTACGCCCATCT 30379016
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | || || || || | || | | ||||| || ||| || ||||| |||||
Sbjct 30379015 TCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCC 30378956
Query 15272 CAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||| |||||| || ||| | || || ||||| |||| || || |||||||||||
Sbjct 30378955 TGAATCTTTGCT-TTCACATTGTCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGT 30378897
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| ||||||||||| || ||||| ||||||||
Sbjct 30378896 CTTTCCTGTCAGAGTCTTCACAAATATTTGCAT 30378864
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208
|| ||||| || || || || || ||||| || || || ||||| || |||| |
Sbjct 30284442 CTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCGCAAGGGTTCTTCCA 30284383
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| | ||||| || || | || | | || ||||| ||||| || || ||
Sbjct 30284382 TCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTA 30284323
Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328
|| ||| ||| || ||| | || ||||| || | | || || || |||||||||
Sbjct 30284322 TCCTGAATCTTGGCTTTCACATTATCAATGGTGTCTGAACTCTCCACCTCCAAGGTAATG 30284263
Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || |||| ||| || ||||| ||||||||
Sbjct 30284262 GTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 30284228
>seq7
Length=51758522
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| ||||| || || || ||||||||||| || |||| | || || || ||
Sbjct 4237640 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTTCTTCCATCCTCCAACTGC 4237581
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || || | ||||| | || ||||| ||| || || || ||||| ||||||
Sbjct 4237580 TTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGAATTTTC 4237521
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| || | || || || | ||||||||| ||||| ||
Sbjct 4237520 GCCTTCACATTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTAATGGTCTTACCCGTA 4237461
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| || || || ||||| |||||
Sbjct 4237460 AGGGTCTTGACGAAAATCTGCAT 4237438
>seq2
Length=49040938
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || || || || ||||| || || | ||| | || || || ||
Sbjct 4562088 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTCCTCCCATCCTCCAACTGC 4562029
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | |||| | || ||||| |||||||| || ||||| |||||||
Sbjct 4562028 TTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATTTTG 4561969
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| || | | || || || | || ||||| || || |||
Sbjct 4561968 GCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAGAGTGATGGTCTTCCCAGTC 4561909
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
| || || |||||||| |||||
Sbjct 4561908 AAGGTCTTGACAAAAATCTGCAT 4561886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362176074846228
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