Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-31 seq6 105 1e-18 seq11 95.1 2e-15 >seq3 Length=52284309 Score = 147 bits (162), Expect = 3e-31 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| || |||||||||||||| || || || ||||| || | |||||||| | Sbjct 34456829 GAGATAACATTCAGGGAATCACCAAGCCCGCGATTCGCCGTCTCGCAAGACGTGGTGGCG 34456888 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| || ||| | |||| ||||| | |||| |||| | |||||||| ||| Sbjct 34456889 TTAAACGTATCAGTGGTCTTATCTACGAAGAAACCCGTGGTGTTCTCAAGATCTTTCTCG 34456948 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || | |||||| || |||||||||||||||| || ||||| |||||| Sbjct 34456949 AGAACGTGATTCGCGATGCTGTCACCTATACCGAGCACGCTCGCCGCAAGACCGTCACCG 34457008 Query 16638 CCATGGATATCGTCTATGC 16656 ||||||| | ||||| || Sbjct 34457009 CCATGGACGTTGTCTACGC 34457027 >seq6 Length=31977256 Score = 105 bits (116), Expect = 1e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| ||||||||||| ||||| |||||||| || || ||| | |||| | | ||| Sbjct 18478423 CTTCGCGATAACATCCAGGGAATAACCAAGCCTGCCATTCGTAGGTTGGCAAGAAGAGGT 18478482 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || || ||| | ||||| |||| | | |||| | || |||||| Sbjct 18478483 GGCGTCAAGAGGATCAGCGGTTTGATATATGAGGAGACCAGAGGTGTTCTCAAAATCTTC 18478542 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | |||||| | ||| || ||||| |||| | |||||||| Sbjct 18478543 TTGGAGAATGTAATTCGTGATGCAGTTACCTACACTGAGCATGCTAGGAGGAAGACTGTT 18478602 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || | |||||| | || |||||| | ||| | ||||| Sbjct 18478603 ACTGCTATGGATGTTGTTTATGCACTCAAAAGACAAGG 18478640 >seq11 Length=50367376 Score = 95.1 bits (104), Expect = 2e-15 Identities = 171/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || ||||| || || || || ||||| || || || || |||| | | ||| Sbjct 42965968 CTTCGCGACAACATTCAGGGCATAACGAAGCCGGCAATTCGGCGGTTGGCGAGAAGAGGT 42965909 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || ||||||| |||| || |||| | | || | ||||| ||| Sbjct 42965908 GGTGTGAAGAGGATCAGTGGATTGATCTACGAGGAGACGAGAGGAGTGCTCAAGATATTC 42965849 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | || ||| | ||||||||||||||| | | ||||| || Sbjct 42965848 TTGGAGAACGTGATTCGCGACGCTGTGACCTATACCGAGCACGCCAGGAGGAAGACGGTT 42965789 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| | || ||||| |||| | || || | | | |||||||||||| Sbjct 42965788 ACGGCCATGGACGTTGTGTATGCGCTGAAGAGGCAGGGAAGAACCCTCTATGGTTTTGGA 42965729 Query 16694 AGTTAATCTT 16703 ||| ||||| Sbjct 42965728 GGTTGATCTT 42965719 Score = 93.3 bits (102), Expect = 7e-15 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || ||||||||||| ||||| || ||||| || || || ||| |||| ||| | ||| Sbjct 6080953 CTGCGCGATAACATCCAGGGAATTACGAAGCCTGCCATTCGGCGTTTGGCGCGTAGGGGT 6080894 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| || ||| | | |||||||||| ||| | || | |||||||| Sbjct 6080893 GGTGTGAAGCGTATCAGTGGTCTCATATATGAAGAGACTCGCGGCGTCCTCAAGATCTTT 6080834 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| || || | || || | || || |||||||| | | ||||| || Sbjct 6080833 CTTGAGAATGTGATTCGCGACGCCGTTACTTACACTGAGCACGCCAGGAGAAAGACAGTT 6080774 Query 16634 ACCTCCATGGATATCGTCTATGCA 16657 || | |||||| | || |||||| Sbjct 6080773 ACGGCAATGGATGTGGTTTATGCA 6080750 Score = 86.0 bits (94), Expect = 1e-12 Identities = 169/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || ||||| || || || || || || || || || || |||| | | ||| Sbjct 43211014 CTTCGCGACAACATTCAGGGCATAACGAAACCGGCGATTCGGCGATTGGCGAGAAGAGGT 43210955 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || ||||||| |||| || |||| | | || ||||||| ||| Sbjct 43210954 GGTGTGAAGAGGATCAGTGGATTGATCTACGAGGAGACGAGGGGAGTGCTGAAGATATTC 43210895 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | || ||| | ||| ||||||||||| | | ||||| || Sbjct 43210894 TTGGAGAATGTGATTCGCGACGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTT 43210835 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| | || ||||| |||| | || || | | | |||||||||||| Sbjct 43210834 ACGGCCATGGACGTTGTGTATGCGCTGAAGAGGCAGGGAAGAACCCTCTATGGTTTTGGA 43210775 Query 16694 AGTTAATCTT 16703 ||| ||||| Sbjct 43210774 GGTTGATCTT 43210765 Score = 82.4 bits (90), Expect = 1e-11 Identities = 168/250 (67%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || ||||| || || || || || || || || || || |||| | | ||| Sbjct 43082538 CTTCGCGACAACATTCAGGGCATAACGAAACCGGCAATTCGGCGATTGGCGAGAAGAGGT 43082479 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || ||||||| |||| || |||| | | || ||||||| ||| Sbjct 43082478 GGTGTGAAGAGGATCAGTGGATTGATCTACGAGGAGACGAGGGGAGTGCTGAAGATATTC 43082419 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | || ||| | ||| ||||||||||| | | ||||| || Sbjct 43082418 TTGGAGAATGTGATTCGCGACGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTT 43082359 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || ||||||| | || ||||| |||| | || || | | | |||||||||||| Sbjct 43082358 ACGGCCATGGACGTTGTGTATGCGCTGAAGAGGCAGGGAAGAACTCTCTATGGTTTTGGA 43082299 Query 16694 AGTTAATCTT 16703 ||| | ||| Sbjct 43082298 GGTTGAACTT 43082289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074552670644