Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq6 259 6e-64 seq9 237 2e-57 seq2 176 6e-39 seq7 167 3e-36 seq1 163 4e-35 seq8 154 2e-32 seq4 122 1e-22 seq11 86.0 8e-12 >seq6 Length=31977256 Score = 259 bits (286), Expect = 6e-64 Identities = 432/614 (70%), Gaps = 24/614 (4%) Strand=Plus/Plus Query 138251 AATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGG 138310 ||| |||||||| ||||| || | | | || || || ||||| || ||||| |||| Sbjct 21888406 AATTGCATTCTCAGGTCCAATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGG 21888465 Query 138311 TCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAGC-AATCTTCCGAT--TCCT 138367 ||| | |||| ||||||||||| ||| || ||||| ||| ||| || || | Sbjct 21888466 TCAGTTTGGTTGATTCTTTGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCAT 21888525 Query 138368 GTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTCATATGATGGGCGTAG- 138426 || ||| || | || |||| ||||| | ||||| ||||||||| |||| || | Sbjct 21888526 ATTTTTC---CAAAGATTTCATACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGT 21888582 Query 138427 CA-GGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACT 138485 || |||| | |||| ||| || || || |||||||||||||| || ||||||| |||| Sbjct 21888583 CATTGTAT--TGGGTGTTGCACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACT 21888640 Query 138486 TTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAACCTACTCAAGAAG-A 138544 || | ||||||||| || |||||| ||| || ||| | || || ||| | | Sbjct 21888641 TTATTTGAAGATGGTGATGGTGAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAA 21888700 Query 138545 AGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTT 138604 | |||||||||||||| |||||| ||| || | ||||| ||||||||||| ||| ||| Sbjct 21888701 AAAAACCTATTCAATGATTACTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTT 21888760 Query 138605 T-AGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGA 138663 | |||||||| |||| | || || |||||| | ||||| || || | || | || | Sbjct 21888761 TCTCTAATAAGCATTGGTTACATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAA 21888820 Query 138664 CTAGTAGTATTGGTATTATTGG-TCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCG 138722 ||| | |||| || |||| || | || | |||||||| || ||||||||||| || Sbjct 21888821 TGAGTGTTCTTGGGATAGTTGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCT 21888879 Query 138723 CAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTT 138782 |||||||| ||||| || ||| |||| || ||||| || || ||| | Sbjct 21888880 CAAGAAATCTGTGCAATAG----------ATTTAAGACTTTATACACTAAAAATATTTTC 21888929 Query 138783 CTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTT 138842 | || |||||| | ||||| |||||| | || |||| |||| ||||||||| | Sbjct 21888930 TTAAACGAAGGTATTCGTGCATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATA 21888989 Query 138843 TTTCCTGAAGAAGT 138856 || | |||||| || Sbjct 21888990 TTCCTTGAAGAGGT 21889003 >seq9 Length=37469608 Score = 237 bits (262), Expect = 2e-57 Identities = 486/715 (68%), Gaps = 22/715 (3%) Strand=Plus/Plus Query 135467 TTTATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTT 135526 |||||| | ||||| |||| ||| ||||| || |||| ||| || || | ||| |||||| Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 135527 GCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTATCCCTTCTAGCAAC 135586 ||| || ||| | || ||||| || ||||| |||||||| ||| | | || Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCG 1917926 Query 135587 GCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATAT 135646 || || | | || || ||||| || ||||||| ||| | ||||||| || ||||| Sbjct 1917927 GCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATAC 1917986 Query 135647 AATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATG 135706 || | ||||||||| ||||| | || | || ||| | | |||| | |||||| Sbjct 1917987 AACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCTTGCTACATG 1918046 Query 135707 GGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTAC 135766 ||||| || |||||||| | || ||||||||| | ||||||| ||| || || Sbjct 1918047 GGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATAT 1918106 Query 135767 TCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACAAGG-TTC 135825 ||| | |||| ||| |||| || || ||||||| || |||| || |||| ||||| | Sbjct 1918107 TCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGC 1918166 Query 135826 TTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCA 135885 ||| | ||||| ||||| | || |||| ||| ||||| || | ||| |||| || || Sbjct 1918167 TTTTCG-GATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCA 1918225 Query 135886 GGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGG 135945 | || || || ||||| ||||||| || ||| |||| | || |||| || || || Sbjct 1918226 GATTGAGCATAATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGG 1918285 Query 135946 TGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGAC 136005 || || ||| |||||| ||| || | || || || ||| | | | Sbjct 1918286 CAACTCCCTATTCAGTGCTATAAATGATTCCTTAGTAAC-------TTTCTACCTTA-AT 1918337 Query 136006 GACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAA 136065 || | | | ||| ||| |||||||| || |||||| | || | | || | Sbjct 1918338 GAATCTGCT--AAT----GAA----GGTTACAAATTTGGTCAAAAGGACAAAATCTATGA 1918387 Query 136066 CATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAA 136125 ||| | |||||||||| ||| || | | ||||||| |||||||| ||||| || Sbjct 1918388 TATTATAGCTGCTCATGATTATTTTGTCGGATTGATCTTTCAATATGCAAGTTTCAATAA 1918447 Query 136126 CTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGGTTT 136180 ||||||| || | |||||||| | || |||| |||| | ||||| |||||| Sbjct 1918448 TTCTCGTTTTTTA-ATTTTTTCCTAGTTGTTTGG-CTGTAATAGGTATTTGGTTT 1918500 >seq2 Length=49040938 Score = 176 bits (194), Expect = 6e-39 Identities = 254/355 (72%), Gaps = 15/355 (4%) Strand=Plus/Plus Query 138525 TTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCG 138584 ||| | || || |||| ||||||| ||||||||||| |||||| || | ||||| Sbjct 27893005 TTTAACCCAACCCAAGCTTAAGAAACTTATTCAATGGTA--TGCTAATCGCTTTTGGTCC 27893062 Query 138585 CAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTT 138644 ||||||||||| |||||||| ||| | || ||||||||| | ||||| Sbjct 27893063 CAAATCTTTGGGGTTGCTTTTTCCAATTA----------CATTTCTTTATGTTATTTGTA 27893112 Query 138645 CCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCT-ACG 138703 || || || ||| | |||| ||| | || | || | ||| || ||| |||| ||| Sbjct 27893113 CCAGTAATTGGTTTATGGATGAGTGCTCTTAGGATAGTCGGTTAGGC-CTTGACCTTACG 27893171 Query 138704 AGCGTATGATTTCGTATCGCAAGAAATTC-GTGCAGCAGAAGATCCTGAATTCGAGACCT 138762 || ||||||||||| || ||||||||| | ||||| |||||||||||||| || | | Sbjct 27893172 TGCTTATGATTTCGTTTCTCAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTT 27893231 Query 138763 TCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATC 138822 | |||||||| || ||||| | || |||||| | |||| ||||| || || |||| Sbjct 27893232 TATACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATC 27893291 Query 138823 AACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 | | ||| |||||| || | || ||||| || || | ||| | || |||||||| Sbjct 27893292 AGCTTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGTAACGCTCT 27893346 >seq7 Length=51758522 Score = 167 bits (184), Expect = 3e-36 Identities = 168/216 (78%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 135701 TACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTC 135760 ||||||||||| || || ||||| || || ||||||||||| ||||||||| ||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 135761 GCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACAA 135820 || || ||||| |||||||| || ||||||||||||||| || |||| || |||| ||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 135821 GG-TTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGT 135879 || |||| | ||||||||||| | || |||||||| ||||| || | ||| |||| Sbjct 47750249 GGAAGCTTTTCG-GATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 135880 TTTCCAGGCAGAACACAACATTCTCATGCATCCTTT 135915 || ||||| || || || ||||| |||||||| || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq1 Length=52205531 Score = 163 bits (180), Expect = 4e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 138579 TGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTC 138638 ||||| ||||||||||| |||||||| ||||| |||||| | || ||||||||| | Sbjct 38350087 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 38350146 Query 138639 TTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAAC 138698 ||||| || || | ||| | |||| ||| | |||| | | ||| | || || ||| Sbjct 38350147 TTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAAC 38350206 Query 138699 CTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAG 138758 |||| || ||||||||||| || |||||||| || ||||| |||||||||||||| ||| Sbjct 38350207 TTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAG 38350266 Query 138759 ACCTTCTACACCAAGAACATTCT 138781 || ||||||||||| || ||||| Sbjct 38350267 ACTTTCTACACCAAAAATATTCT 38350289 >seq8 Length=59662532 Score = 154 bits (170), Expect = 2e-32 Identities = 189/257 (74%), Gaps = 11/257 (4%) Strand=Plus/Minus Query 138555 TCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAG 138614 ||||||||||||||||| || | ||||| ||||||||||| |||||||| Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTT--------- 1232821 Query 138615 CGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTATT 138674 | |||| | || ||||||||| | ||||| || || | ||| | || | ||| | || Sbjct 1232820 CATTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 138675 GGTATTATTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGT 138734 || | | ||| | || | ||| || | || ||||||||||| || |||||||| || Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 138735 GCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGT 138794 ||||| ||| |||||||||| ||||| ||| ||| ||| || |||| ||| || ||||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTC-TCTTAA-AAAGGT 1232643 Query 138795 CTGCGTGCCTGGATGGC 138811 | ||||| |||||||| Sbjct 1232642 ATTCGTGCGTGGATGGC 1232626 >seq4 Length=45960019 Score = 122 bits (134), Expect = 1e-22 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 138693 CTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAA 138752 || ||| |||| || ||||||||||| || |||||||| |||||| | ||||| ||||| Sbjct 43482223 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGCATGA-AAGATTCTGAA 43482281 Query 138753 TTCGAGACCTTCTACAC-CAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGC 138811 || || || || ||||| || || ||||| | || |||||| | ||||| |||||||| Sbjct 43482282 TTTGATACTTTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGC 43482341 Query 138812 TCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAA 138871 | ||||| ||||| |||||| || | || ||||| || || | ||| | || || Sbjct 43482342 AATTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAA 43482401 Query 138872 CGCTCT 138877 |||||| Sbjct 43482402 CGCTCT 43482407 >seq11 Length=50367376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 138552 TATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAAT 138611 ||||||||||||||| |||| || | ||||| ||||||||||| |||||||| ||| Sbjct 3718489 TATTCAATGGTTACTCCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 3718548 Query 138612 AAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCC 138646 || | |||| | || ||||||||| | ||||| || Sbjct 3718549 AAACATTGGTTACATTTCTTTATGTTATTTGTACC 3718583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627962442483200