Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 seq7 131 3e-25 seq9 127 3e-24 >seq8 Length=59662532 Score = 134 bits (148), Expect = 2e-26 Identities = 270/396 (68%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 194583 GAAACCTGAGTATGTATTTCTTGCTGCTGCTAAGGTAGGTGGTATAGGTGGTAACTCTAC 194642 ||||||||| | ||| || | ||||| || || || ||||| || || ||| || Sbjct 9194184 GAAACCTGAATTTGTCATTGTAGCTGCAGCCAAAGTTGGTGGAATCCATGCCAACAACAC 9194125 Query 194643 CTATCCTGCCGATTTCAT--CTATGACAATCTGATGATTCAGACAAATGTTATTGATGCT 194700 ||| ||||| |||||||| | || ||| || || ||||| ||||| || ||| || Sbjct 9194124 CTACCCTGCTGATTTCATTGCCAT--CAACCTCCAAATCCAGACCAATGTCATCGATTCT 9194067 Query 194701 GCATATCGTAATGGAGTTAAGAAACTATTGTTTCTAGGTTCATCTTGCATCTATCCTAAG 194760 || ||||| ||||| | ||||||||||||||| | ||||| |||||||| || || || Sbjct 9194066 GCTTATCGCAATGGTGCCAAGAAACTATTGTTTTTGGGTTCCTCTTGCATTTACCCCAAA 9194007 Query 194761 TTTCCAAAGATACCTATTACAGAGGATCAGTTACTTGCTAGTCCTTTGGAAGAATCTAAT 194820 ||| | ||| ||| |||| ||| || ||| || | || ||||| | ||| Sbjct 9194006 TTTGCTCCCCAACCGATTCCAGAAGATGCTTTGCTTACTGGACCCTTGGAGCCTACAAAT 9193947 Query 194821 -AGTGCTTATGCAATTGCAAAGATAGCAGGTATGAGGATGTGTCAAGCATATCGTCAGCA 194879 | || ||||| ||||| ||||| || || || | ||||| || || || | || Sbjct 9193946 GAATG-GTATGCCATTGCCAAGATTGCTGGGATCAAAATGTGCCAGGCTTACAGAATTCA 9193888 Query 194880 GTATGGATTTAATGCAATATCATTAATGCCTACTAATCTATACGGACCTAATGATAATTT 194939 |||| | ||||||| || |||||| || || |||| ||||| | || ||||| Sbjct 9193887 GTATAAGTGGGATGCAATTTCGGGAATGCCCACCAACTTATATGGACCATACGACAATTT 9193828 Query 194940 TGATATTAATAATGGTCATGTATTACCATCACTCAT 194975 | | | ||| ||||| ||||| | ||||| Sbjct 9193827 CCACCCTGAGAATTCACATGTGTTACCCGCTCTCAT 9193792 Score = 89.7 bits (98), Expect = 8e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 212419 TTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGTGAT 212478 || || ||||||||||| || |||||| |||| || | ||| |||| |||| Sbjct 31293222 TTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGAT 31293281 Query 212479 GTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTC 212538 || ||||| |||| ||||||||||||||||| ||||| ||| | ||||| || || ||| Sbjct 31293282 ATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATTTC 31293341 Query 212539 CCACTTGACTTAGC 212552 || || || |||| Sbjct 31293342 CCTCTAGATCTAGC 31293355 >seq7 Length=51758522 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 211897 TACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTT 211956 |||||||| | | || |||||| | ||| | ||||||||||||||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 211957 GCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAG 212016 || |||||||| ||||| |||| ||| ||||| ||| | | || || | ||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 212017 GGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTA 212076 || || || || |||||||||||||| || || || || ||||| || ||| | ||| Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 212077 TTCCAAGCAGAACATAACATCCTTATGCACCCATT 212111 || || || || ||||| || |||||||| ||||| Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq9 Length=37469608 Score = 127 bits (140), Expect = 3e-24 Identities = 305/456 (67%), Gaps = 8/456 (2%) Strand=Plus/Plus Query 211663 TTTATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTA 211722 ||||| | || || |||| || ||||| || |||| || || || | || || || Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 211723 GCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAAC 211782 ||| || | | ||||| ||||| ||||| |||||||| | ||| ||| Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCG 1917926 Query 211783 GCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTAC 211842 || || | ||| || || |||||||| ||||||| | | ||||||| || || ||| Sbjct 1917927 GCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATAC 1917986 Query 211843 AATGGTGGTCCTTACCAGTTGGTAATCTTCCAC-TTCCTTATCGGAATCTCAGCAT---A 211898 || | |||||||| | | | | ||| || || |||| | | | | ||| | | Sbjct 1917987 AACGACGGTCCTTATGAACTAAT--TGTTCTACATTTCTTA-CTTAGTGT-AGCTTGCTA 1918042 Query 211899 CATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGC 211958 |||||| | | ||||||||| | ||||| ||||||| || |||||| |||||| Sbjct 1918043 CATGGGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGC 1918102 Query 211959 TTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGG 212018 |||||| | |||| |||| | | | | ||| ||| | | || || | ||||| || Sbjct 1918103 ATATTCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGG 1918162 Query 212019 TTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATT 212078 || || || || ||||||||||| || | || || ||||| || ||| | ||||| Sbjct 1918163 AAGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATT 1918222 Query 212079 CCAAGCAGAACATAACATCCTTATGCACCCATTCCA 212114 || || ||||| || |||||||| | ||| || Sbjct 1918223 TCAGATTGAGCATAATATTCTTATGCATCAATTTCA 1918258 Score = 93.3 bits (102), Expect = 7e-14 Identities = 154/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 211615 TGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCA 211674 |||||||||||| | ||||| | | | | ||||||| | ||||| | || Sbjct 33213522 TGGTTTGGTGTTTTGATGATTCTTACTTTATTGACTGCAACTTCTGTATTTATTATCGCT 33213581 Query 211675 TTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTC 211734 || || | || ||||| | ||||| || || || |||||||| | ||| || || Sbjct 33213582 TTTATTGTTGCTCCTCCATTAGATATTGATGGTATTCGTGAACCTGATTTTGGATCCTTA 33213641 Query 211735 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTA 211794 | ||||| || || ||||| ||||||||| || |||| |||| | || || ||||| Sbjct 33213642 CTTTATGGAAATAATATCATTTCTGGTGCAATTATTCCTACTTCCACGGCTATAGGTTTG 33213701 Query 211795 CACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTG 211835 || || |||||||| |||||||| | || ||||||| || Sbjct 33213702 CATTTTTATCCTATATGGGAAGC-GACTCTGTTGATGAATG 33213741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807548053136480